Job Description P52073 Confidence 100.00% Date Thu Jan 5 12:05:09 GMT 2012 Rank 1 Aligned Residues 318 % Identity 21% Template c2uuvC_ PDB info PDB header:transferase Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase; PDBTitle: alkyldihydroxyacetonephosphate synthase in p1 Resolution 1.99 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		C	D	Y	S	Q	A	L	L	E	Q	V	N	Q	A	I	S	D	K	T	P	L	V	I	Q	G	S	N	S	K	A	F	L	G	R	P	V	.	.	.	T	G	Q	T	L	D	V	R	C	H	R	G	I	V	N	Y	D	P	T	E	L	V	I	T	A	R	V	G	T	P	L	V	T	I	E	A	A	L	E	S	A
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.
Template Conservation
Template Sequence		P	H	S	H	E	E	V	E	R	L	V	Q	L	A	H	K	Y	N	V	V	I	I	P	M	G	G	G	S	N	I	V	G	A	I	E	P	V	E	R	F	T	V	S	I	D	M	R	R	M	N	K	V	L	W	V	D	R	R	E	M	T	A	C	I	Q	V	G	I	M	G	P	E	L	E	K	Q	L	H	K	Q
Template Known Secondary structure				S															T							S	S				S	S		T	T	S												T	T									T	T	T	T						T	T		B										T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	M	L	P	C	E	P	P	H	Y	G	E	E	A	T	W	G	G	M	V	A	C	G	L	A	G	P	R	R	P	W	S	G	S	V	R	D	F	V	L	G	T	R	I	I	T	G	A	G	K	H	L	R	F	G	G	E	V	M	K	N	V	A	G	Y	D	L	S	R	L	M	V	G	S	Y	G	C	L	G
Query Conservation
Alig confidence													.																																									.	.	.	.	.	.	.	.
Template Conservation													.																																									.	.	.	.	.	.	.	.
Template Sequence		G	V	S	L	G	H	D	P	D	S	F	.	E	F	S	T	L	G	G	W	L	A	T	C	S	S	G	H	Q	S	D	K	Y	G	D	I	E	D	M	A	V	S	F	R	T	V	T	P	T	G	T	L	.	.	.	.	.	.	.	.	E	L	R	A	G	I	N	Y	K	H	I	I	L	G	S	E	G	T	L	G
Template Known Secondary structure		T								T	T	G	.	G	G		B								T				T	T																			T	T				.	.	.	.	.	.	.	.								T					T	T		T	T	T	T
Template Predicted Secondary structure													.																																									.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.									280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	T	E	I	S	M	K	V	L	P	R	P	R	A	S	L	S	L	R	R	E	I	S	L	Q	E	.	A	M	S	E	I	A	E	W	Q	L	Q	P	L	P	I	S	G	L	C	Y	F	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	T	E	A	V	M	K	V	H	A	V	P	Q	A	V	E	Y	Y	G	F	L	F	P	T	F	A	H	A	V	S	A	L	Q	Q	I	R	S	S	E	V	I	P	T	M	I	R	V	Y	D	P	E	E	T	Q	L	S	F	A	W	K	P	M	V	K	K	Y	L	H	Y	I	R	S	F	D	F	K	N	V	C
Template Known Secondary structure															S										S	S														T	T				S															T	T											T	T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		A	L	W	I	R	L	E	G	G	E	G	S	V	K	A	A	R	E	L	L	G	G	.	.	.	.	.	.	.	.	.	.	E	E	V	A	G	Q	F	W	Q	Q	L	R	E	Q	Q	L	P	F	F	.	.	.	.	.	.	S	L	P	G	T	L	W	R	I	S	L	P	S	D	A	P	M	M	D	L	P	G	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	I	I	G	F	E	G	P	K	K	V	V	D	F	H	R	T	S	V	F	D	I	L	S	K	N	A	A	F	G	L	G	S	A	P	G	K	T	W	A	E	K	R	Y	D	L	P	Y	I	R	D	F	L	L	D	H	N	M	W	V	D	V	A	E	T	T	V	S	Y	A	N	L	Q	T	L	W	K	D	A
Template Known Secondary structure																											T	T	T								S	S	S	G	G	G	G	G	G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	D	W	G	G	A	L	R	W	L	K	S	T	A	E	D	N	Q	I	H	R	I	A	R	N	A	G	G	H	A	T	R	F	S	A	G	D	G	G	F	A	P	L	S	A	P	L	F	R	Y	H	Q	Q	L	K	Q	Q	L	D	P	C	G	V	F	N	P
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		K	Q	T	F	V	K	H	I	P	A	W	I	C	A	H	I	S	H	.	.	.	.	.	.	.	.	.	T	Y	T	N	G	V	C	L	Y	.	.	.	F	I	F	A	S	K	Q	R	G	W	I	N	V	Y	R	S	L	K	E	T	I	D	P	K	D	I	C	N	P
Template Known Secondary structure																				.	.	.	.	.	.	.	.	.			T	T						.	.	.									T														T	T			B	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.										.	.	.	.	.	500	.	.	.				.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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