 |
Job Description | P0A9V8 | Confidence | 98.27% | Date | Thu Jan 5 11:11:30 GMT 2012 |
Rank | 258 | Aligned Residues | 108 |
% Identity | 15% | Template | d1f06a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.10 |
|
 |
  |   |
1 | . | |
|
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | . |
. |
A | I | A | F | I | G | L | G | Q | M | G | S | P | M | A | S | N | L | L | . |
Q | Q | G | H | Q | L | R | . |
V | F | D | V | N | A | E | A | V | R | H | L | V | D | K | G | A | T | P | A | A | N | P | A | Q | A | A | K | D | A | E | F | I | I | T | M | L | P | N | G | D | L | V | R | N | V | L | F |
Query Conservation |   |
|   | . | . |   |
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   | . |   |   |
|   |   |
|   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
M | T | N | I | R | V | A | I | V | G | Y | G | N | L | G | R | S | V | E | K | L | I | A | K | Q | P | D | M | D | L | V | G | I | F | S | R | R | A | T | L | D | T | K | T | . |
. |
. |
P | V | F | D | V | A | D | V | D | K | H | A | D | D | V | D | V | L | F | L | C | M | G | S | A | T | D | I | P | E | Q | A | P |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  | S | S | S |
|
| S | S | S | S | . | . | . |
|  |  |  | G | G | G | G | G | G | T | T | T | T |
| S |  |  |  |  |
| S |
| T | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
| . | . | . |
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | N | G | V | C | E | G | L | S | T | D | A | L | V | I | D | M | S | . |
. |
T | I | H | P | L | Q | T | D | K | L | I | A | D | M | Q | A | K | G | F | S | M | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
| . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
| . | . | . | . | . | . |
|   |
|
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
K | F | A | Q | . |
. |
. |
. |
. |
. |
F | A | C | T | V | D | T | Y | D | N | H | R | D | I | P | R | H | R | Q | V | M | N | E | A | A | T | A | A | G | N | V | A | L |
Template Known Secondary structure |   |
 |  | T | T | . | . | . | . | . | . | T | S |  |  |  |
|
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|