Job Description P0A9V8 Confidence 97.85% Date Thu Jan 5 11:11:30 GMT 2012 Rank 312 Aligned Residues 121 % Identity 16% Template c3oa0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure											.																	.													.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																	.													.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	A	I	A	F	I	G	L	.	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	G	H	.	Q	L	R	V	F	D	V	N	A	E	A	V	.	R	H	L	V	D	K	G	A	T	P	A	A	N	P	A	Q	A	A	K	.	.	.	.	.	.	.	.	.	.	D	A	E	F	I	I	T	M	L	P	N
Query Conservation											.																	.													.																				.	.	.	.	.	.	.	.	.	.
Alig confidence											.																	.													.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	R	F	A	L	T	G	L	A	G	Y	I	A	P	R	H	L	K	A	I	K	E	V	G	G	V	L	V	A	S	L	D	P	A	T	N	V	G	L	V	D	S	F	F	P	E	A	E	F	F	T	E	P	E	A	F	E	A	Y	L	E	D	L	R	D	R	G	E	G	V	D	Y	L	S	I	A	S	P	N
Template Known Secondary structure										T	T	S	S	S											T	T									S	S				G	G	G	G	G	T		T	T					S															T	T				S						S		G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E	G	L	S	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	G	F	S	M	M	D	V	P	V	G	R	T	S	A
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		H	L	H	Y	P	Q	I	R	M	A	L	R	L	G	A	N	A	L	S	E	K	P	L	.	.	.	.	.	V	L	W	P	E	E	I	A	R	L	K	E	L	E	A	R	T	G	R	R	V	Y	T	V	L	Q	L	R	V	H	P
Template Known Secondary structure		G	G											T	T							S	S	S	.	.	.	.	.		S																T								G	G	G	G
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions