Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9V8
Confidence97.54%DateThu Jan 5 11:11:30 GMT 2012
Rank354Aligned Residues78
% Identity15%Templatec3ketA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10........ .20......... 30....... ..40.........50....... ..60.........70....
Predicted Secondary structure 


..


.


...





..





Query SS confidence 















. .










.







. . .



















. .
















Query Sequence  AIAFIGLGQMGSPMAS. . NLLQQGHQLRV. FDVNAEAV. . . RHLVDKGATPAANPAQAAKD. . AEFIITMLPNGDLVRNV
Query Conservation   
 


 
 

  

 .. 
   
  
  . 
      ...      
     
  
    ..

 
   
         
Alig confidence 















..










.







...



















..
















Template Conservation   
 




 

 


        
  


 

 

 
        
  
    

 
 
    

 





   

 

Template Sequence  NVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTEAQEVA
Template Known Secondary structure 

STS
GGGTSS
TTSTTTTSB
TTS
BGGGTSSS



S
GGG
Template Predicted Secondary structure 


























Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   75....80
Predicted Secondary structure 
Query SS confidence 





Query Sequence  LFGENG
Query Conservation        
Alig confidence 





Template Conservation    

 
Template Sequence  DILVKA
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 





   166...170.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions