Job Description P0A9V8 Confidence 100.00% Date Thu Jan 5 11:11:30 GMT 2012 Rank 21 Aligned Residues 275 % Identity 17% Template c3gg2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	A	I	A	F	I	G	L	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	G	H	Q	L	R	V	F	D	V	N	A	E	A	V	R	H	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	G	A	T	P	A	A	N	P	A	Q	A	A	K	D	A	E	F
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		L	D	.	I	A	V	V	G	I	G	Y	V	G	L	V	S	A	T	C	F	A	E	L	G	A	N	V	R	C	I	D	T	D	R	N	K	I	E	Q	L	N	S	G	T	I	P	I	Y	E	P	G	L	E	K	M	I	A	R	N	V	K	A	G	R	L	R	F	G	T	E	I	E	Q	A	V	P	E	A	D	I
Template Known Secondary structure				.							S													T	T								S										T	T			S	S			T	T											T	T	S					S						G	G	G		S
Template Predicted Secondary structure				.
Template SS confidence
		79	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query Sequence		I	I	T	M	L	P	N	G	.	.	.	.	.	.	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E	G	L	S	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	.	.	.	.	.	.	.	.	G	F	S	M	M	D	V	P	V	G	R	T	S	A
Query Conservation										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	I	A	V	G	T	P	A	G	E	D	G	S	A	D	M	S	Y	V	L	D	A	A	R	S	I	G	R	A	M	S	R	Y	I	L	I	V	T	K	S	T	V	P	V	G	S	Y	R	L	I	R	K	A	I	Q	E	E	L	D	K	R	E	V	L	I	D	F	D	I	A	S	N	P	E	F	L	K	E	G
Template Known Secondary structure										B		T	T	S	S	B																		S								S				T	T																T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		127	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		N	A	I	T	G	T	L	.	.	.	.	L	L	L	A	G	G	T	A	E	Q	V	E	R	A	T	P	I	L	M	A	M	G	S	E	L	I	N	A	G	G	P	G	M	G	I	R	V	K	L	I	N	N	Y	M	S	I	A	L	N	A	L	S	A	E	A	A	V	L	C	E	A	L	N	L	P	F	D	V	A
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																								.	.
Template Conservation																																				.	.
Template Sequence		N	A	I	D	D	F	M	K	P	D	R	V	V	V	G	V	D	S	D	R	A	R	E	L	I	T	S	L	Y	K	P	M	L	R	.	.	V	L	F	M	D	I	A	S	A	E	M	T	K	Y	A	A	N	A	M	L	A	T	R	I	S	F	M	N	D	V	A	N	L	C	E	R	V	G	A	D	V	S	M	V
Template Known Secondary structure		S							S		S							S	S												T	T	T			.	.																																						T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	V	M	S	G	T	A	A	G	K	G	H	F	T	T	S	W	P	N	K	V	L	S	G	D	L	S	P	A	F	M	I	D	L	A	H	K	D	L	G	I	A	L	D	V	A	N	Q	L	H	V	P	M	P	L	G	A	A	S	R	E	V	Y	S	Q	A	R	A	A	G	R	G	R	Q	D	W	S	A	I
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Sequence		R	L	G	I	G	S	D	S	R	I	G	S	K	F	.	.	.	.	.	.	.	.	.	.	L	Y	P	G	C	G	Y	G	G	S	C	F	P	K	D	V	K	A	L	I	R	T	A	E	D	N	G	Y	R	M	E	V	L	E	A	V	E	R	V	N	E	K	Q	K	S	I	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure							T	S	T	T	T		S	S	S	.	.	.	.	.	.	.	.	.	.				S	S				S	S	S															T	T																	T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.											.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.										380
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	V	R	V	S	A	G	M	T	A	K	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	K	F	S	T	Y	Y	K	G	N	V	Q	G	R
Template Known Secondary structure									T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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