Job Description P0A9V8 Confidence 97.65% Date Thu Jan 5 11:11:30 GMT 2012 Rank 341 Aligned Residues 209 % Identity 16% Template c3f46A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methenyltetrahydromethanopterin hydrogenase; PDBTitle: the crystal structure of c176a mutated [fe]-hydrogenase (hmd)2 holoenzyme from methanocaldococcus jannaschii Resolution 1.95 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	A	T	P	A	A	N	P	A	Q	A	A	K	D	A	E	F	I	I	T	M	L	P	N	G	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E	G	L	S	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	G	F	S	M	M	D	V	P	V
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		D	V	G	L	K	V	T	S	D	D	R	E	A	V	E	G	A	D	I	V	I	T	W	L	P	K	G	.	.	.	N	K	Q	P	D	I	I	K	K	F	A	D	A	I	P	E	G	A	I	V	T	H	A	A	T	I	P	T	T	K	F	A	K	I	F	K	D	L	G	R	E	D	L	N	I	T	S	Y	H	P
Template Known Secondary structure		G	G	T					S							T	T		S								S	S	.	.	.	S								T	T	G	G	G	S		T	T							T	T	S												T	T		T	T	S						B
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	T	S	A	N	A	I	T	G	T	L	L	L	L	A	G	G	T	A	E	Q	V	E	R	A	T	P	I	L	M	A	M	G	S	E	L	I	N	A	G	G	P	G	M	G	I	R	V	K	L	I	N	N	Y	M	S	I	A	L	N	A	L	S	A	E	A	A	V	L	C	E	A	L	N	L	P	F	D	V
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		G	C	V	P	.	E	M	K	G	Q	V	Y	I	A	E	G	Y	A	S	E	E	A	V	N	K	L	Y	E	I	G	K	I	A	R	G	K	A	F	K	M	P	A	N	L	I	G	P	V	C	D	M	C	S	A	V	T	A	T	V	Y	A	G	L	L	A	Y	R	D	A	V	T	K	I	L	G	A	P	A	D	F
Template Known Secondary structure		S	S		T	.	T	T									S	S	S																	S															S	T	T																					T	S
Template Predicted Secondary structure						.
Template SS confidence
		203	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.									.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		A	V	K	V	M	S	G	T	A	A	G	K	G	H	F	T	T	S	W	P	N	K	V	L	S	G	D	L	S	P	A	F	M	I	D	L	.	.	.	.	.	.	.	.	A	H	K	D	L	G	I	A	L	D	V	A	N	Q	L	H	V
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	M	M	A	D	E	A	L	T	Q	I	H	N	L	M	K	E	K	G	I	A	N	M	E	E	A	L	D	P	A	A	L	L	G	T	A	D	S	M	C	F	G	P	L	A	E	I	L	P	T	A	L	K	V	L	E	K	H	K	V
Template Known Secondary structure																						G	G	G	G	G	G	T	S		G	G	G	G	T	T	T	G	G	G	G		S	G	G	G	T	T												T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions