 |
Job Description | P0A9V8 | Confidence | 98.61% | Date | Thu Jan 5 11:11:30 GMT 2012 |
Rank | 199 | Aligned Residues | 119 |
% Identity | 13% | Template | c3e9mC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:oxidoreductase, gfo/idh/moca family; |
PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis
|
Resolution | 2.70 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
. | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . |  |
|
|  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | A | F | I | G | L | G | Q | M | G | S | P | M | A | S | N | L | L | Q | Q | . |
G | H | Q | L | R | . |
V | F | D | V | N | A | E | A | V | R | H | L | V | D | K | G | A | T | P | . |
. |
A | A | N | P | A | Q | A | A | K | D | . |
. |
A | E | F | I | I | T | M | L | P | N | G | D | L | V | R | N | V | L | F |
Query Conservation |   |
  |
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   | . |
|   |   |
|   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . |   |   |
|   |   |
|   |   |   |   | . | . |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
R | Y | G | I | X | S | T | A | Q | I | V | P | R | F | V | A | G | L | R | E | S | A | Q | A | E | V | R | G | I | A | S | R | R | L | E | N | A | Q | K | X | A | K | E | L | A | I | P | V | A | Y | G | S | Y | E | E | L | C | K | D | E | T | I | D | I | I | Y | I | P | T | Y | N | Q | G | H | Y | S | A | A | K | L |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| B |
| S | S |  |  |  |  |  | T |
| T | T |
| S |  |  |  |  |
|
|
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | N | G | V | C | E | G | L | S | T | D | A | L | V | I | D | M | S | T | I | H | P | L | Q | T | D | K | L | I | A | D | M | Q | A | K | G | F | S | M | M | D | V | P | V | G | R | T | S | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   | . | . | . | . | . |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
A | L | S | Q | G | K | P | V | L | L | E | K | P | F | . |
. |
. |
. |
. |
T | L | N | A | A | E | A | E | E | L | F | A | I | A | Q | E | Q | G | V | F | L | X | E | A | Q | K | S | V | F | L | P |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|  |  |  |
| S | S |
| . | . | . | . | . |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| S | G | G | G |
|  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|