Job Description P0A9V8 Confidence 98.19% Date Thu Jan 5 11:11:30 GMT 2012 Rank 266 Aligned Residues 118 % Identity 12% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																											.	.										.	.	.	.	.	.
Query SS confidence																											.	.										.	.	.	.	.	.
Query Sequence		M	A	A	I	A	F	I	G	L	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	G	H	.	.	Q	L	R	V	F	D	V	N	A	.	.	.	.	.	.	E	A	V	R	H	L	V	D	K	G	A	T	P	A	A	N	P	A	Q	A	A	K	D	A	E	F	I	I	T	M	L	P	N	G	D	L	V	R
Query Conservation																											.	.										.	.	.	.	.	.
Alig confidence																											.	.										.	.	.	.	.	.																				.
Template Conservation																																																															.
Template Sequence		V	N	K	I	T	V	V	G	G	G	E	L	G	I	A	C	T	L	A	I	S	A	K	G	I	A	D	R	L	V	L	L	D	L	S	E	G	T	K	G	A	T	M	D	L	E	I	F	N	L	P	N	V	E	I	S	K	D	L	S	A	.	S	A	H	S	K	V	V	I	F	T	V	N	S	Q	S	Y	L	D
Template Known Secondary structure											S														T			S								S		G	G	G		T	T							T		T	T					S		G	G	G	.	G	T	T		S
Template Predicted Secondary structure																																																															.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		73	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		N	V	L	F	G	E	N	G	V	C	E	G	L	S	.	.	.	.	.	.	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	G	F	S	M	M	D	V
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	Q	S	N	V	D	M	F	R	A	L	V	P	A	L	G	H	Y	S	Q	H	S	V	L	L	V	A	S	Q	P	V	E	I	M	T	Y	V	T	W	K	L	S	T	F	P	A	N	R	V	I	G	I
Template Known Secondary structure												T	T								S	T	T							S	S	S													T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions