Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9V8
Confidence98.15%DateThu Jan 5 11:11:30 GMT 2012
Rank270Aligned Residues107
% Identity17%Templatec3dapB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.. ......10.........20... ..... .30.........40.........50.........60.........70......
Predicted Secondary structure 

..



.

.














Query SS confidence 


. .



















.




.















































Query Sequence  MAA. . IAFIGLGQMGSPMASNLLQQ. GHQLR. VFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLF
Query Conservation 
  ..
 


 
 

  

  
   .
  
 .  
            
     
  
    

 
   
           
Alig confidence 


..



















.




.











...


























......
Template Conservation 
  


 
 
 
 

      
      




           ...

    
        
 
 
  
    ......
Template Sequence  MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKT. . . PVFDVADVDKHADDVDVLFLCMGSATD. . . . . .
Template Known Secondary structure 




STT
SSS
S

SSSS...
GGGGGGGTTT
S
S
TTT......
Template Predicted Secondary structure 















...
















......
Template SS confidence 















































































   1........10.........20.........30.........40.... .....50.........60.........70.
 
   77..80.........90... ......100.........110.......
Predicted Secondary structure 




...







Query SS confidence 
















. . .























Query Sequence  GENGVCEGLSTDALVID. . . MSTIHPLQTDKLIADMQAKGFSMM
Query Conservation                

 ... 

                    
Alig confidence  .















...























Template Conservation  .       
 

  

          
       

   
    
Template Sequence  . IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVAL
Template Known Secondary structure  .TTTS




GGGT
Template Predicted Secondary structure  .













Template SS confidence 











































   72.......80.........90.........100.........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions