Job Description P0A9V8 Confidence 99.46% Date Thu Jan 5 11:11:30 GMT 2012 Rank 101 Aligned Residues 262 % Identity 15% Template c3c7cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine) Resolution 3.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	F	I	G	L	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	.	G	H	Q	L	R	V	F	D	V	N	A	E	A	V	R	H	L	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	A	T	P	A	A	N	P	A	Q	A	A	K	D	A
Query Conservation																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	C	V	C	G	G	G	N	G	A	H	T	L	S	G	L	A	A	S	R	D	G	V	E	V	R	V	L	T	L	F	A	D	E	A	E	R	W	T	K	A	L	G	A	D	E	L	T	V	I	V	N	E	K	D	G	T	Q	T	E	V	K	S	R	P	K	V	I	T	K	D	P	E	I	A	I	S	G	A
Template Known Secondary structure									S											T	T	S	T	T									S	T	T										T	T	S									T	T	S										S				S							T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		E	F	I	I	T	M	L	P	N	G	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E	G	L	S	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	G	F	S	M	M	D	V	P	V	G	R	T	S	A	N	A	I	T	G	T	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence													.	.	.	.																										.																																		.	.	.	.	.	.
Template Conservation													.	.	.	.																										.
Template Sequence		D	V	V	I	L	T	V	P	A	F	A	.	.	.	.	H	E	G	Y	F	Q	A	M	A	P	Y	V	Q	D	S	A	L	I	V	G	L	P	S	Q	A	.	G	F	E	F	Q	C	R	D	I	L	G	D	K	A	A	A	V	S	M	M	S	F	E	T	L	P	W	A	C	R	I	K	E	F	G	R	K	V	E
Template Known Secondary structure		S						S		G	G	G	.	.	.	.									T	T	T			T	T						T	T			S	.	S										G	G	G	G	G	T	S						S	S		S								T	T	T
Template Predicted Secondary structure													.	.	.	.																										.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
										133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	L	L	L	L	A	G	G	T	A	E	Q	V	E	R	A	T	P	I	L	M	A	M	G	S	E	L	I	N	A	G	G	P	G	M	G	I	R	V	K	L	I	N	N	Y	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	G	T	K	S	V	L	A	A	S	L	I	K	G	T	A	K	T	V	D	P	L	S	T	L	Q	M	L	H	G	A	E	P	V	F	R	L	A	K	H	F	L	E	M	L	I	M	S	Y	S	F	V	H	P	A	I	L	F	G	R	W	G	S	W	D	G	K	P	V	P	E	A	P	L	F	Y	Q	G	I
Template Known Secondary structure							S										S	S			S												S	S	S						S								T	T		T	T											T	T			S			B	S	S			B	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
							179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																											.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	I	A	L	N	A	L	S	A	E	A	A	V	L	C	E	A	L	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	D	V	A	V	K	V	M	S	G	T	A	A	.	.	.	.	.	.	G	K	G	H	F	T	T	S	W	P
Query Conservation		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	A	T	A	D	M	L	T	A	C	S	N	E	C	K	D	V	A	N	A	I	M	A	A	C	P	G	N	D	L	S	D	V	K	D	I	Y	Q	W	Y	L	E	Y	Y	H	E	D	I	Q	D	D	H	D	L	Y	H	A	I	T	T	N	K	S	Y	K	G	L	V	H	P	V	K	A	V	D	G	G	V	A
Template Known Secondary structure																											S	T	T				T	T												S	T	T	T	B	S			S	S							T	B	G	G	G	T	T		B							T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	L	S	G	D	L	S	P	A	F	M	I	D	L	A	H	K	D	L	G	I	A	L	D	V	A	N	Q	L	H	V	P	M	P	L	G	A	A	S	R	E	V	Y	S	Q	A	R	A	A	G	R
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		P	D	F	G	N	R	Y	L	T	E	D	I	P	M	G	M	.	.	.	.	.	I	V	F	K	G	V	A	I	A	A	G	V	A	I	P	S	N	D	K	L	I	M	W	A	Q	E	K	I	G	K	E	Y
Template Known Secondary structure						S	T	T	T	T	T	T	T	T	T	T		.	.	.	.	.											T																	T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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