Job Description P0A9V8 Confidence 99.46% Date Thu Jan 5 11:11:30 GMT 2012 Rank 100 Aligned Residues 233 % Identity 16% Template c2qytA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from porphyromonas2 gingivalis w83 Resolution 2.15 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.															.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																								.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	F	I	G	L	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	G	.	.	.	.	.	.	H	Q	L	R	V	F	D	V	N	A	E	A	V	R	H	L	V	D	K	G	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	N	P	A	Q	A	A	K	D	A	E	F	I	I
Query Conservation																								.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		K	I	A	V	F	G	L	G	G	V	G	G	Y	Y	G	A	X	L	A	L	R	A	A	A	T	D	G	L	L	E	V	S	W	I	A	R	.	G	A	H	L	E	A	I	R	A	A	G	G	L	R	V	V	T	P	S	R	D	F	L	A	R	P	T	C	V	T	D	N	P	A	E	V	G	T	V	D	Y	I	L
Template Known Secondary structure									S																	T	T	S	S									.											T	S						S	S								S				S
Template Predicted Secondary structure																																						.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.																											.	.
Query SS confidence																																																			.	.	.																											.	.
Query Sequence		T	M	L	P	N	G	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E	G	L	S	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	.	.	.	K	G	F	S	M	M	D	V	P	V	G	R	T	S	A	N	A	I	T	G	T	L	L	L	L	A	.	.
Query Conservation																																																			.	.	.																											.	.
Alig confidence									.	.	.	.																																							.	.	.																											.	.
Template Conservation									.	.	.	.
Template Sequence		F	C	T	K	D	Y	D	.	.	.	.	X	E	R	G	V	A	E	I	R	P	X	I	G	Q	N	T	K	I	L	P	L	L	N	G	A	D	I	A	E	R	X	R	T	Y	L	P	D	T	V	V	W	K	G	C	V	Y	I	S	A	R	K	S	A	P	G	L	I	T	L	E	A	D	R	E	L	F	Y	F	G
Template Known Secondary structure					S	S	S		.	.	.	.									G	G	G											S		S	S	S						T	T	T	S		T	T	T	B														T	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
					138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																				.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	G	G	T	A	E	Q	V	E	R	A	T	P	I	L	M	A	M	G	S	E	L	I	N	A	G	G	P	G	M	G	I	R	V	K	L	I	N	N	Y	M	S	I	A	L	N	A	L	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	V	L	C	E	A	L
Query Conservation		.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	L	P	E	Q	T	D	D	E	V	R	L	A	E	L	L	T	A	A	G	I	R	A	Y	N	P	T	D	I	D	W	Y	I	X	K	K	F	X	X	I	S	V	T	A	T	A	T	A	Y	F	D	K	P	I	G	S	I	L	T	E	H	E	P	E	L	L	S	L	L	E	E	V	A	E	L	F	R	A	K
Template Known Secondary structure				S	S	S															T	T							S																								T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	P	F	D	V	A	V	K	V	M	S	G	T	A	A	G	K	G	H	F	T	T	S	W	P	N	K	V	L	S	G	D	L	S	P	A	F	M	I	D	L	A	H	K	D	L	G	I	A	L	D	V	A	N	Q	L	H	V	P	M	P	L	G	A	A	S	R	E
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	V	V	Q	Q	L	L	D	K	Q	R	K	X	E	T	L	T	.	.	.	.	.	.	.	.	.	.	.	G	Y	V	V	R	E	A	E	A	L	R	V	D	L	P	X	Y	K	R	X	Y	R
Template Known Secondary structure		T	S			.	.	.	.	.	.	.	.	.	.	.	.	.		S	S														T	T	T	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.														.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.												.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions