Job Description P0A9V8 Confidence 99.79% Date Thu Jan 5 11:11:30 GMT 2012 Rank 74 Aligned Residues 237 % Identity 11% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	F	I	G	L	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	G	H	Q	L	R	V	F	D	V	N	A	E	A	V	R	H	L	V	D	K	G	A	T	P	A	A	N	P	A	Q	A	A	K	D	A	E	F	I	I	T	M	L	P	N	G	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E
Query Conservation
Alig confidence																							.	.	.	.																		.	.	.																														.	.	.	.	.	.
Template Conservation																							.	.	.	.																		.	.	.																														.	.	.	.	.	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	V	Y	G	.	.	.	G	K	A	A	T	L	E	K	H	P	E	V	V	F	V	I	V	P	D	R	Y	I	K	T	V	A	N	H	L	.	.	.	.	.	.
Template Known Secondary structure								S	T	T													.	.	.	.	B			S	S									T	T	T	T	.	.	.					T	T											S										T	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																		.	.	.																														.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	G	F	S	M	M	D	V	P	V	G	R	T	S	A	N	A	I	T	G	T	L	L	L	L	A	G	G	T	A	E	Q	V	E	R	A	T	P	I	L	M	A	M	G	S	E	L	I	N	A	G	G
Query Conservation
Alig confidence		.																					.	.	.	.	.																																																					.	.
Template Conservation		.																					.	.	.	.	.																																																					.	.
Template Sequence		.	N	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	I	F	K	.	.	.	.	.	K	S	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	F	G	L	E	G	D	E	R	G	L	P	I	V	K	K	I	A	E	E	I	S	G	K	Y	F	V	I	.	.
Template Known Secondary structure		.			S	S								S	S	S		S	T	T	T		.	.	.	.	.	S	S	S								S				T	T	G	G	G		G	G	G									T	T													S	S						.	.
Template Predicted Secondary structure		.																					.	.	.	.	.																																																					.	.
Template SS confidence
			77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	M	G	I	R	V	K	L	I	N	N	Y	M	S	I	A	L	N	A	L	S	A	E	A	A	V	L	C	E	A	L	N	L	P	F	D	V	A	V	K	V	M	S	G	T	A	A	G	K	G	H	F	T	T	S	W	P	N	K	V	L	S	G	D	L	S	P	A	F	M	I	D	L	A	H	K	D	L	G
Query Conservation
Alig confidence		.																																								.	.	.	.	.	.	.	.	.
Template Conservation		.																																								.	.	.	.	.	.	.	.	.
Template Sequence		.	E	K	K	K	A	Y	H	L	A	A	V	I	A	S	N	F	P	V	A	L	A	Y	L	S	K	R	I	Y	T	L	L	G	L	D	E	P	E	L	L	.	.	.	.	.	.	.	.	.	I	H	T	L	X	K	G	V	A	D	N	I	K	K	X	R	V	E	C	S	L	T	G	P	V	K	R	G	D	W	Q
Template Known Secondary structure		.															T																T	T		S						.	.	.	.	.	.	.	.	.															S								S
Template Predicted Secondary structure		.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
			153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	D	V	A	N	Q	L	H	V	P	M	P	L	G	A	A	S	R	E	V	Y	S	Q	A	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	E	E	E	R	R	E	Y	E	K	I	F	G	N	T	V	L	Y	D	E	I	V	K	L	L	R	E
Template Known Secondary structure														S	S		S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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