Job Description P0A9V8 Confidence 99.78% Date Thu Jan 5 11:11:30 GMT 2012 Rank 75 Aligned Residues 278 % Identity 14% Template c1yj8C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: initial structural analysis of plasmodium falciparum glycerol-3-2 phosphate dehydrogenase Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.															.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	A	I	A	F	I	G	L	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	G	.	.	.	.	.	.	.	H	Q	L	R	V	F	D	V	N	.	.	A	E	A	V	R	H	L	V	D	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	P	A	A	N	P	A	Q	A	A	K	D
Query Conservation																										.	.	.	.	.	.	.										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																						.	.	.	.	.	.	.										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		L	K	.	I	S	I	L	G	S	G	N	W	A	S	A	I	S	K	V	V	G	T	N	A	K	N	N	Y	L	F	E	N	E	V	R	M	W	I	R	D	E	F	E	R	M	V	D	I	I	N	N	K	H	E	N	T	K	Y	L	K	G	V	P	L	P	H	N	I	V	A	H	S	D	L	A	S	V	I	N	D
Template Known Secondary structure		B		.							S																		T	T	B		S								S														B		T	T	T	S	T	T		B			T	T					S	S	S					T	T
Template Predicted Secondary structure				.
Template SS confidence
		22	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																													.									.	.	.	.	.	.
Query SS confidence																													.									.	.	.	.	.	.
Query Sequence		A	E	F	I	I	T	M	L	P	N	G	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E	G	.	L	S	T	D	A	L	V	I	.	.	.	.	.	.	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	G	F	S	M	M	D	V	P	V	G	R	T	S	A	N	A	I	T
Query Conservation																													.									.	.	.	.	.	.
Alig confidence														.	.	.	.												.									.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		A	D	L	L	I	F	I	V	P	C	Q	Y	.	.	.	.	L	E	S	V	L	A	S	I	K	E	I	K	I	A	S	H	A	K	A	I	S	L	T	K	G	F	I	V	K	K	N	Q	M	K	L	C	S	N	Y	I	S	D	F	L	N	I	P	C	S	A	L	S	G	A	N	I	A	M	D	V	A	M	E	N
Template Known Secondary structure			S											.	.	.	.									T						T	T									S					T	T													S	S	S								S								T	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	L	L	L	L	A	G	G	T	A	E	Q	V	E	R	A	T	P	I	L	M	A	M	G	S	E	L	I	N	A	G	G	P	G	M	G	I	R	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	N	N	Y	M	S	I	A	L	N	A	L	S	A	E	A	A	V	L	C	E
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	E	A	T	I	G	G	N	D	K	D	S	L	V	I	W	Q	R	V	F	D	L	P	Y	F	K	I	N	C	V	N	E	T	I	E	V	E	I	C	G	A	L	K	N	I	I	T	L	A	C	G	F	C	D	G	L	N	L	P	T	N	S	K	S	A	I	I	R	N	G	I	N	E	M	I	L	F	G	K
Template Known Secondary structure										S														B	T	T							S		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.																.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		A	L	N	L	P	F	D	V	A	V	K	V	M	S	G	T	A	A	G	K	G	H	F	T	T	S	W	P	N	K	V	L	S	G	D	L	S	P	A	F	M	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	K	D	L	G	I	A	L	D	V	A	N	Q	L	H	V	.	.	P	M
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		V	F	F	Q	K	F	N	E	N	I	L	L	E	S	C	G	F	A	D	I	I	T	S	F	L	A	G	R	N	A	K	C	S	A	E	F	I	K	S	T	P	K	K	T	W	E	E	L	E	N	E	I	L	K	G	Q	K	L	Q	G	T	V	T	L	K	Y	V	Y	H	M	I	K	E	K	N	M	T	N	E	F
Template Known Secondary structure				S	S				G	G	G	G	G	S	T	T	T										S	S	S	S										T	T	T	T										T	T	T	T																			T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	A	A	S	R	E	V	Y	S	Q	A	R	A	A	G	R	G	R	Q	D	W	S	A	I	L	E	Q	V	R	V	S	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		P	L	F	T	V	L	H	K	I	S	F	E	.	.	.	.	.	.	.	N	E	D	P	S	S	L	L	K	T	F	M	N	N	K
Template Known Secondary structure													S	.	.	.	.	.	.	.				T	T							S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.								.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions