Job Description P0A9V8 Confidence 98.31% Date Thu Jan 5 11:11:30 GMT 2012 Rank 250 Aligned Residues 118 % Identity 11% Template c1pzfD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:lactate dehydrogenase; PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.													.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	A	F	I	G	L	G	Q	M	G	S	P	M	A	S	N	L	L	Q	Q	G	.	H	Q	L	R	V	F	D	V	N	A	E	A	V	R	H	L	V	D	K	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	P	A	A	N	P	A	Q	A	A	K	D	A	E	F	I	I	T	M	L	P	N	G
Query Conservation																									.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	V	A	M	I	G	S	G	M	I	G	G	T	M	G	Y	L	C	A	L	R	E	L	A	D	V	V	L	Y	D	V	V	K	G	M	P	E	G	K	A	L	D	L	S	H	V	T	S	V	V	D	T	N	V	S	V	R	A	E	Y	S	Y	E	A	A	L	T	G	A	D	C	V	I	V	T	A	G	L	T
Template Known Secondary structure								S		S														T									S	S	S	S																T	T										S						T	T		S							S		S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	V	R	N	V	L	F	G	E	N	G	V	C	E	G	L	S	T	D	A	L	V	I	D	M	S	T	I	H	P	L	Q	T	D	K	L	I	A	D	M	Q	A	K	G	F	S	M	M	D	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	P	G	K	P	D	S	E	W	S	R	N	D	L	L	P	F	N	S	K	I	I	R	E	I	G	Q	N	I	K	K	Y	C	P	K	T	F	I	I	V	V	T	N	P	L	D	C	M	V	K	V	M	C	E	A	S	G	V	P	T	N	M	I	C	G	M
Template Known Secondary structure		S		T	T			G	G	G			S	G	G	G																				T	T	S							S	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions