Return to main results Retrieve Phyre Job Id

Job DescriptionP22787
Confidence99.55%DateThu Jan 5 11:39:10 GMT 2012
Rank48Aligned Residues222
% Identity27%Templated2ce7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.........200....... ..210.........220.........230.........240.....
Predicted Secondary structure 












..............





















Query SS confidence 



























. . . . . . . . . . . . . .





































Query Sequence  DAVSRALQHDLSDVIGQEQGKRGLEITA. . . . . . . . . . . . . . AGGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALES
Query Conservation           
  

 

  




 


..............

 
 


 
 





 


 
  


 
   
  
 
Alig confidence 



























..............


























...........
Template Conservation 
 
        
 
 
 
  
  
 
 
                   


 

 




 

  

   ...........
Template Sequence  YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEA. . . . . . . . . . .
Template Known Secondary structure 




S



GGG

S

TTTT



S

TTSS...........
Template Predicted Secondary structure 






























...........
Template SS confidence 















































































   150.........160.........170.........180.........190.........200.........210........
 
   246...250.........260.........270.........280.........290... ......300.........310.........320..
Predicted Secondary structure 








































...












Query SS confidence 















































. . .




























Query Sequence  AAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLA. . . HNGVLFLDELPEFERRTLDALREPIESGQ
Query Conservation    
 
  
           


 

   
   
 

     

 
 

...
 







      

  

  



 
Alig confidence  .................






























...




























Template Conservation  .................      
             
         
      

 


 
 
                
Template Sequence  . . . . . . . . . . . . . . . . . NVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHDEREQTLNQLLVE
Template Known Secondary structure  .................T

GGGTTT

TTT
STGGGT



Template Predicted Secondary structure  .................














Template SS confidence 















































































   219220.........230.........240.........250.........260.........270.........280.
 
   323......330.........340.........350.........360.........370...... ...380.........390.........400
Predicted Secondary structure 































..










Query SS confidence 





















































. .























Query Sequence  IHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFL. . DRFDLSLEIPLPPPGILSKTVVPG
Query Conservation 
 
 
 
     

 
 



 

   
                    

 


..

 

 
 
               
Alig confidence 







......












.....................





..



















....
Template Conservation          ......    
  

    .....................      
  

        
    
  
....
Template Sequence  MDGFDSKE. . . . . . GIIVMAATNRPDI. . . . . . . . . . . . . . . . . . . . . LDPALLRPGRFDKKIVVDPPDMLGRKKI. . . .
Template Known Secondary structure  S
GGG......TS
GGG.....................S
GGGGSTTSS





....
Template Predicted Secondary structure 



......







.....................














....
Template SS confidence 















































































   291....... .300.........310. ........320.........330.........
 
   401........410.........420.........430.........440.........450.........460.........470.........480
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  ESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDII
Query Conservation 
 
      
  

     
    
  
    
   
 
   
   
        

 
    










 
   
Alig confidence  ..............























................

























Template Conservation  ..............                  

  
 ................
 
  

  
   
   
       
Template Sequence  . . . . . . . . . . . . . . LEIHTRNKPLAEDVNLEIIAKRTP. . . . . . . . . . . . . . . . GFVGADLENLVNEAALLAAREGRDKI
Template Known Secondary structure  ..............TTS
B
TT

T
T................T

TT
SSB
Template Predicted Secondary structure  ..............








................








Template SS confidence 















































































   340.........350.........360... ......370.........380.........
 
   481........490
Predicted Secondary structure 
Query SS confidence 









Query Sequence  TRQHLQEAVS
Query Conservation     

 


 
Alig confidence 









Template Conservation     
   

 
Template Sequence  TMKDFEEAID
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   390.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions