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Job DescriptionP22787
Confidence99.91%DateThu Jan 5 11:39:10 GMT 2012
Rank12Aligned Residues248
% Identity20%Templated1um8a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200........ .210.........220.........230.........240
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Query Sequence  VIGQEQGKRGLEITAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
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Template Sequence  VIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHL. . . . . .
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   93......100.........110.........120.........130.........140.........150.........160......
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . DIPIAISDATSLTVENILTRLLQASDWNVQKAQKGIVFIDEIDKIGEGVQQALLKIVEG
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GGG


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   167..170.........180.........190.........200.........210.........220.....
 
   321........330.........340.........350... ......360.........370.........380..
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Query Sequence  GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQ. . . . . . . . . . . . . . . . . . GNHNRCTPEQTLRYLNRLSGPFLDRFDLS
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Template Sequence  SLVNQIDTSD. . . . . ILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVL
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   248.250....... ..260.........270.........280.........290.........300.........310.........320..
 
   383......390.........400.........410.........420.........430.........440.........450.........460..
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Query Sequence  LEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQ
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Template Sequence  STLDSISLEAMV. . . . . . . . . DILQKPKNALIKQYQQLFKMDEVDL. . . . . . . . . IFEEEAIKEIAQLALERKTGARGLR
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   338.340......... 350.........360.........370.... .....380.........390.........
 
   463.. ....470......... 480.........490
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Query Sequence  RLL. . KVARTIADIDQSDI. . . . ITRQHLQEAVS
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Template Sequence  AIIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAE
Template Known Secondary structure  TGGGGTTS
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   400.........410.........420.........430...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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