Return to main results Retrieve Phyre Job Id

Job DescriptionP22787
Confidence99.52%DateThu Jan 5 11:39:10 GMT 2012
Rank52Aligned Residues223
% Identity21%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DLSDVIGQEQGKRGLEITAAGG. . HNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPF
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Template Sequence  NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFA
Template Known Secondary structure  STTT

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   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  RSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNP
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Template Sequence  RLTVSKPS. . . . . . . . . KHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS. . . . . . . . . . . . . GVTRFCLICNY
Template Known Secondary structure  S





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   115....120.. .......130.........140.........150.........160. ........170..
 
   347..350.........360.........370.........380.........390.........400.........410.........420......
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Query Sequence  SPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKLNA
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Template Sequence  VTR. . . . . . . . . . . . . . . . . . . . . IIDPLASQCSKFRFKALDA. . . . . . . . . . . . . . . . . . . . . SNAIDRLRFISEQENV
Template Known Secondary structure  GGG.....................S
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   173.. ....180.........190.... .....200.........210
 
   427..430.........440.........450.........460.........470......... 480.........
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Query Sequence  WLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDI. ITRQHLQEAV
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Template Sequence  KCDDGVLERILDIS. . . . . . . . . . . . . . AGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELA
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   211........220.... .....230.........240.........250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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