Return to main results Retrieve Phyre Job Id

Job DescriptionP22787
Confidence99.26%DateThu Jan 5 11:39:10 GMT 2012
Rank73Aligned Residues210
% Identity24%Templated1sxja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DLSDVIGQEQGKRGLEITAAG. . . . . . . . . . . . . . . . . . . GHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAIL
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Template Sequence  NLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSK
Template Known Secondary structure  SGGG

S
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STTSSTT

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   306...310.........320.........330.........340.........350.........360.........370.........380.....
 
   250.........260.........270.........280.........290.........300......... 310.........320......
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Query Sequence  SLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERR. . . TLDALREPIESGQIHLS
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Template Sequence  TLLNAGVKNALDNM. . . . . . . . . . . . . . . . . SVVGYFKHQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRK. . . . . .
Template Known Secondary structure  TGGGGTT

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SGGG

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   386...390......... 400.........410.........420.........430.........440..
 
   327..330.........340.........350.........360.........370.........380.........390.........400......
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Query Sequence  RTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATV
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Template Sequence  . . . . . . . TSTPLILICNERNL. . . . . . . . . . . . . . . . . . . . . . . PKMRPFDRVCLDIQFRRPDANSIK. . . . . . . . . . . .
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TTS.......................STTGGGTTTS




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   447..450.........460 .........470.........480....
 
   407..410.........420.........430.........440.........450.........460.........470.........480......
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Query Sequence  KQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQ
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Template Sequence  . . . . . . . . SRLMTIAIREKFKLDPNVIDRLIQTTRG. . . . . . . . . . . . . . DIRQVINLLSTI. . . . . STTTKTINHENIN
Template Known Secondary structure  ........T



TTTTT..............
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   485....490.........500.........510.. .......520.... .....530.......
 
   487..490
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Query Sequence  EAVS
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Template Conservation      
Template Sequence  EISK
Template Known Secondary structure 
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   538.540.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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