Return to main results Retrieve Phyre Job Id

Job DescriptionP22787
Confidence99.04%DateThu Jan 5 11:39:10 GMT 2012
Rank83Aligned Residues172
% Identity28%Templated1r7ra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200......... 210.........220.........230.........240.........250.
Predicted Secondary structure 







...............




















Query SS confidence 






















. . . . . . . . . . . . . . .









































Query Sequence  QHDLSDVIGQEQGKRGLEITAAG. . . . . . . . . . . . . . . GHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSL
Query Conservation    
  

 

  




 




............... 
 


 
 





 


 
  


 
   
  
   
 
 
Alig confidence 






















...............
























.................
Template Conservation        
 
    
  
   
   
         
      


 

 




 

  

   .................
Template Sequence  QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC. . . . . . . . . . . . . . . . .
Template Known Secondary structure 

S
SS
SSSS



T







B

TTSST.................
Template Predicted Secondary structure 



















.................
Template SS confidence 















































































   473......480.........490.........500.........510.........520.........530.....
 
   252.......260.........270.........280.........290... ......300...... ...310........
Predicted Secondary structure 







































...








..........
Query SS confidence 









































. . .












. . . . . . . . . .











Query Sequence  VNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLA. . . HNGVLFLDELPEF. . . . . . . . . . ERRTLDALREPI
Query Conservation   
           


 

   
   
 

     

 
 

...
 







   ..........   

  

  
Alig confidence  ...........






























...












..........











Template Conservation  ...........                                     

 


 
 
                      
Template Sequence  . . . . . . . . . . . QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQI
Template Known Secondary structure  ...........T

TS
TTTT
SSSGGGT




TT
Template Predicted Secondary structure  ...........



















Template SS confidence 















































































   536...540.........550.........560.........570.........580.........590.........600....
 
   319320.........330.........340.........350.........360.........370...... ...380.........390.
Predicted Secondary structure 


































..








.....
Query SS confidence 

























































. .














. . . . .
Query Sequence  ESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFL. . DRFDLSLEIPLPPPG. . . . .
Query Conservation 


 
 
 
 
     

 
 



 

   
                    

 


..

 

 
 
      .....
Alig confidence 



.............













.....................





..














.....
Template Conservation      .............    

  

    .....................         

   
    
    
  
Template Sequence  LTEM. . . . . . . . . . . . . DNVFIIGATNRPDI. . . . . . . . . . . . . . . . . . . . . IDPAILRPGRLDQLIYIPLPDEKSRVAI
Template Known Secondary structure  T
.............




BS
TT.....................TS
GGGSSTTS





Template Predicted Secondary structure 
.............








.....................










Template SS confidence 















































































   605... .610.........620.. .......630.........640.........650
 
   392.......400.........410.........420
Predicted Secondary structure  ............



Query SS confidence  . . . . . . . . . . . .




























Query Sequence  . . . . . . . . . . . . ILSKTVVPGESSATVKQRVMAARERQFKR
Query Conservation  ............         
 
      
  

     
Alig confidence  ............




























Template Conservation      
      
  

  
 
 
  

  

  
   
   
Template Sequence  LKANLRKSDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE
Template Known Secondary structure  TT






SS

Template Predicted Secondary structure 











Template SS confidence 








































   657..660.........670.........680.........690.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions