Return to main results Retrieve Phyre Job Id

Job DescriptionP22787
Confidence99.82%DateThu Jan 5 11:39:10 GMT 2012
Rank21Aligned Residues233
% Identity17%Templated1r6bx3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SDVIGQEQGKRGLEITAA. . . . . . . . . . . GGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQK
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Template Sequence  MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL. . . . . GIELLRFDMSEYMERHTVSR
Template Known Secondary structure  TTS
S
TT
S
TTS
S
STTSS.....T
GGG
SSSS

SS
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   458.460.........470.........480.........490.........500.........510.. .......520.........530..
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  QWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQ
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Template Sequence  LIGAP. . . . . . . . . . PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD. . NNGRKADFRNVV
Template Known Secondary structure  S



..........S
STT
SSTGGGS
S..TTT
TT
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   533.... ..540.........550.........560.........570.........580........ .590.........600
 
   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  LVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFK
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Template Sequence  LVMTTNAGVRAM. . . . . . . . . . . . . EEIKKIFTPEFRNRLDNIIWFDHLSTDVI. . . . . . . . . . HQVVDKFIVELQVQLD
Template Known Secondary structure 
SS


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TT
S




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   601........610.. .......620.........630.........640. ........650.......
 
   420.........430.........440.........450.........460.........470.....
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Query Sequence  RQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADID
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Template Sequence  QKGVS. . . . . . . . . . . . LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN
Template Known Secondary structure  TT............

BTTTBTTTT
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   675.... 680.........690.........700.........710........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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