Return to main results Retrieve Phyre Job Id

Job DescriptionP22787
Confidence99.78%DateThu Jan 5 11:39:10 GMT 2012
Rank26Aligned Residues247
% Identity17%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........200......... 210.........220.........230.........240.........250...
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Query Sequence  LSDVIGQEQGKRGLEITAAG. . . . . . . . . . . . . . . . GHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVN
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Template Sequence  DQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVG
Template Known Secondary structure  TT

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GGGGSS

SGG
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   254.....260.........270.........280.........290... ......300...... ...310.........
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Query Sequence  AESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLA. . HNGVLFLDELPEF. . . . . . . . . . . . ERRTLDALREPIE
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Template Sequence  KEVDSII. . . . . . . . . . . . . . . . . . . . RDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVE
Template Known Secondary structure  GSTT....................TTTT


GGGGS

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   94.....100 .........110.........120.........130.........140.........150...
 
   320.........330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  SGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVP
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Template Sequence  GSTVST. . . KHGMVKTDHILFIASGAFQVARPSD. . . . . . . . . . . . . . . . . LIPELQGRLPIRVELTALSAADFERILTE
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   288.290... ......300.........310........ .320.........330.........340.......
 
   400.........410.........420.........430.........440.........450.........460...... ...470.......
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Query Sequence  GESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLK. . VARTIADIDQS
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Template Sequence  . . . . . . . PHASLTEQYKALMATEGVNIAFTTDAVKKIAE. . . . . . AAFRVNEKTENIGARRLHTVMERLMDKISFSASDM
Template Known Secondary structure  .......STT
TT

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   348.350.........360.........370......... 380.........390.........400.........410....
 
   478 .480.........
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Query Sequence  D. . . . IITRQHLQEAV
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Template Sequence  NGQTVNIDAAYVADAL
Template Known Secondary structure  TT

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   415....420.........430
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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