Return to main results Retrieve Phyre Job Id

Job DescriptionP22787
Confidence99.77%DateThu Jan 5 11:39:10 GMT 2012
Rank28Aligned Residues221
% Identity28%Templated1ixsb2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200........ .210.........220.........230.........240.........250.........260.
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Query Sequence  DLSDVIGQEQGKRGLEITAA. . . . . . . GGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQW
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Template Sequence  TLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL. . . . . . . GVNLRVTSGPAIEKPGDLAA
Template Known Secondary structure  SGGGS
S
TTSSS





TTS
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TTT

S
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   10.........20.........30.........40.........50.........60.. .......70.........80..
 
   262.......270.........280.........290.........300.........310.........320..... ....330......
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Query Sequence  RQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHL. . . . . SRTRAKITYPA
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Template Sequence  ILANSLEE. . . . . . . . . . . . . . . . . . . . . . . . . GDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELP
Template Known Secondary structure  TT

T.........................T
TGGG

S
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TT




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   83......90 .........100.........110.........120.........130.......
 
   337..340.........350.........360.........370.........380.........390.........400.........410......
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Query Sequence  RFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARER
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Template Sequence  RFTLIGATTRPGL. . . . . . . . . . . . . . . . . . . . . ITAPLLSRFGIVEHLEYYTPEELA. . . . . . . . . . . . . . . . . . . . QG
Template Known Secondary structure 

S

SS.....................
S
GGGGG
S




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   138.140.........150 .........160.........170.... ..
 
   417..420.........430.........440.........450.........460.........470.........480.........490......
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Query Sequence  QFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVSYRAIDR
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Template Sequence  VMRDARLLGVRITEEAALEIGRRS. . . . . . . . . . . . . . RGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDE
Template Known Secondary structure  GGG


B
T..............TSSTTS

S
B
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   177..180.........190.........200 .........210.........220.........230.........240..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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