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Job DescriptionP22787
Confidence99.32%DateThu Jan 5 11:39:10 GMT 2012
Rank70Aligned Residues213
% Identity28%Templated1e32a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DLSDVIGQEQGKRGLEITA. . . . . . . . . . . . . . . AGGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVN
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Template Sequence  GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE
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GGG

S
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TTSSTT

TTS
TT
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   254.....260.........270.........280.........290.........300...... ...310.........320..
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Query Sequence  AESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEF. . . . . . . . . . . ERRTLDALREPIESGQ
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Template Sequence  SESNLRKAFEEAEKNA. . . . . . . . . . . . . . . . . . . . . . . . . PAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK
Template Known Secondary structure  T
.........................SSSGGGT




TTT

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   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  IHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGES
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Template Sequence  QR. . . . . . . . . . . AHVIVMAATNRPN. . . . . . . . . . . . . . . . . . . SIDPALRRFGRFDREVDIGIPD. . . . . . . . . . . . .
Template Known Secondary structure 
S...........S
S
GG...................GS
GGGTSTTSS





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   337. .340.........350. ........360.........370...
 
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Query Sequence  SATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSD. . . .
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Template Sequence  . . . . . . . . ATGRLEILQIHTKNMKLADDVDLEQVANETH. . . . . . . . . . . . . GHVGADLAALCSEAALQAIRKKMDLIDL
Template Known Secondary structure  ........TTTTS
B
TT


T.............T



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   374.....380.........390.........400.... .....410.........420.........430..
 
   479480.........490
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Query Sequence  . . . . . . . . . . . . . IITRQHLQEAVS
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Template Sequence  EDETIDAEVMNSLAVTMDDFRWALS
Template Known Secondary structure 
SS




B
T
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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