Job Description P22787 Confidence 100.00% Date Thu Jan 5 11:39:10 GMT 2012 Rank 1 Aligned Residues 258 % Identity 20% Template c3f8tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:predicted atpase involved in replication control, PDBTitle: crystal structure analysis of a full-length mcm homolog2 from methanopyrus kandleri Resolution 1.90 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		L	S	D	V	I	G	Q	E	Q	G	K	R	G	L	E	I	T	A	A	G	G	H	.	.	.	.	.	.	.	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	P	D	L	S	N	E	E	A	L	E	S	A	A	I	L	S	L	V	N	A	E	S	V	Q	K	Q	W	R
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	P	L	P	G	A	E	E	V	G	K	M	L	A	L	Q	L	F	S	C	V	G	K	N	S	E	R	L	H	V	L	L	A	G	Y	P	V	V	C	S	E	I	L	H	H	V	L	D	H	L	A	P	R	G	V	Y	.	.	.	.	.	.	.	.	.	.	.	V	D	L	R	R	T	E	L	T	D	L	T
Template Known Secondary structure					S	T	T													T	T			S	S	G	G	G								S																T		S	S				.	.	.	.	.	.	.	.	.	.	.			G	G	G							S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.												.	270	.	.	.	.	.	.	.	.	.	280
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	P	F	R	S	P	H	H	S	A	S	L	T	A	M	V	G	G	G	A	I	P	G	P	G	E	I	S	L	A	H	N	G	V	L	F	L	D	E	L	P	E	F	E	R	R	T	L	D	A	L	R	E	P	I	E	S	G	Q	I	H	L	S	R	T	R	A	K	I	T	Y	P	A	R	F	Q	L	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	V	L	K	E	D	R	G	W	A	L	R	A	G	A	A	V	L	A	D	G	G	I	L	A	V	D	H	L	E	G	A	P	E	P	H	R	W	A	L	M	E	A	M	D	K	G	T	V	T	V	D	G	I	.	.	.	.	A	L	N	A	R	C	A	V	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.						S	S	S											T	T	T	S								T	T																S					T	T		.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Template SS confidence
														281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	N	P	S	P	T	G	H	Y	Q	G	N	H	N	R	C	T	P	E	Q	T	L	R	Y	L	N	R	L	S	G	P	F	L	D	R	F	D	L	S	L	E	I	P	L	P	P	P	G	I	L	S	K	T	V	V	P	G	E	S	S	A	T	V	K	Q	R	V	M	A	A	R	E	R	Q	F	K	R	Q	N
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	N	P	G	E	P	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	P	I	A	R	I	D	L	D	Q	D	F	L	S	H	F	D	L	I	A	F	L	G	V	P	S	Y	T	L	L	R	R	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	A	I	R	E	H	P	A	P
Template Known Secondary structure										S		.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G			S						T	T		S					T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.													.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.																.	.	390	.	.	.	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	N	A	W	L	D	S	P	E	I	R	Q	F	C	K	L	E	S	E	D	A	M	W	L	E	G	T	L	I	H	L	G	L	S	I	R	A	W	Q	R	L	L	K	V	A	R	T	I	A	D	I	D	Q	S	D	I	I	T	R	Q	H	L	Q	E	A	V	S	Y	R	A	I	D	R	L	L	I	H	L	Q
Query Conservation
Alig confidence																																																																					.	.
Template Conservation																																																																					.	.
Template Sequence		E	L	T	E	E	A	R	K	R	L	E	H	W	Y	E	T	R	R	E	E	V	E	E	R	L	G	M	G	L	P	T	L	P	V	T	R	R	Q	L	E	S	V	E	R	L	A	K	A	H	A	R	M	R	L	S	D	D	V	E	P	E	D	V	D	I	A	A	.	.	E	L	V	D	W	Y	L	E	T	A	M
Template Known Secondary structure																												T	T																									T	T		S												.	.										T	T
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480			.	.	.	.	.	.	.	.	.	490	.
		503
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		492

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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