Job Description P22787 Confidence 99.55% Date Thu Jan 5 11:39:10 GMT 2012 Rank 45 Aligned Residues 213 % Identity 27% Template c3d8bB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:fidgetin-like protein 1; PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp Resolution 2.00 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.															210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	S	R	A	L	Q	H	D	L	S	D	V	I	G	Q	E	Q	G	K	R	G	L	E	I	T	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	P	D	L	S	N	E	E	A	L	E	S	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	M	D	H	G	P	P	V	N	W	E	D	I	A	G	V	E	F	A	K	A	T	I	K	E	I	V	V	W	P	M	L	R	P	D	I	F	T	G	L	R	G	P	P	K	G	I	L	L	F	G	P	P	G	T	G	K	T	L	I	G	K	C	I	A	S	Q	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	B			S					G	G	G	S		S												T							T	T	T	S		T	T	S	S			S						S	S	T	T	S	S													.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		A	I	L	S	L	V	N	A	E	S	V	Q	K	Q	W	R	Q	R	P	F	R	S	P	H	H	S	A	S	L	T	A	M	V	G	G	G	A	I	P	G	P	G	E	I	S	L	A	H	N	G	V	L	F	L	D	E	L	P	E	F	.	.	E	R	R	T	L	D	A	L	R	E	P	I	E	S	G	Q	I	H
Query Conservation																																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																																				.	.																	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																																																						.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	F	F	S	I	.	.	S	A	S	S	L	T	E	G	E	K	M	V	R	A	L	F	A	V	A	R	C	Q	Q	P	A	V	I	F	I	D	E	I	D	S	L	L	S	S	R	R	I	K	T	E	F	L	V	Q	L	D	G	A	E	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							.	.		G	G	G	G																	T		S							T	T																						.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																																																						.	.
Template SS confidence
																		459	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	T	R	A	K	I	T	Y	P	A	R	F	Q	L	V	A	A	M	N	P	S	P	T	G	H	Y	Q	G	N	H	N	R	C	T	P	E	Q	T	L	R	Y	L	N	R	L	S	G	P	F	L	D	R	F	D	L	S	L	E	I	P	L	P	P	P	G	I	L	S	K	T	V	V	P	G	E	S	S	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	D	R	I	L	V	V	G	A	T	N	R	P	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	E	A	A	R	R	R	L	V	K	R	L	Y	I	P	L	P	E	A	S	A	R	K	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.										S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S																.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
													537	.	.	540	.	.	.	.	.	.	.	.	.	550																						.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		T	V	K	Q	R	V	M	A	A	R	E	R	Q	F	K	R	Q	N	K	L	N	A	W	L	D	S	P	E	I	R	Q	F	C	K	L	E	S	E	D	A	M	W	L	E	G	T	L	I	H	L	G	L	S	I	R	A	W	Q	R	L	L	K	V	A	R	T	I	A	D	I	D	Q	S	D	I	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	Q	I	V	I	N	L	M	S	K	E	Q	C	C	L	S	E	E	E	I	E	Q	I	V	Q	Q	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	S	G	A	D	M	T	Q	L	C	R	E	A	S	L	G	P	I	R	S	L	Q	T	A	A	T	I	T	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.								T	T	S		B														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T																													G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.														.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
							480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	I	T	R	Q	H	L	Q	E	A	V	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		D	Q	V	R	P	I	A	Y	I	D	F	E	N	A	F	R
Template Known Secondary structure		G	G	S			B
Template Predicted Secondary structure
Template SS confidence
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions