Job Description P22787 Confidence 96.92% Date Thu Jan 5 11:39:10 GMT 2012 Rank 156 Aligned Residues 69 % Identity 17% Template c2xzlA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex Resolution 2.40 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	A	F	L	E	G	K	H	A	L	E	R	P	K	P	T	D	A	V	S	R	A	L	Q	H	D	L	S	D	V	I	G	Q	E	Q	G	K	R	G	L	E	I	T	A	A	G	G	H	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L
Query Conservation
Alig confidence																																	.	.																.
Template Conservation																																	.	.																.
Template Sequence		L	Y	Y	K	I	L	G	H	Q	V	V	D	I	S	F	D	V	P	L	P	K	E	F	S	I	P	N	F	A	Q	L	.	.	N	S	S	Q	S	N	A	V	S	H	V	L	Q	R	P	.	L	S	L	I	Q	G	P	P	G	T	G	K	T	V	T	S	A	T	I	V	Y	H	L
Template Known Secondary structure								T														S			S		T	T	S				.	.												T	T		S	.							S	T	T	S	S
Template Predicted Secondary structure																																	.	.																.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions