Job Description P22787 Confidence 98.11% Date Thu Jan 5 11:39:10 GMT 2012 Rank 98 Aligned Residues 99 % Identity 29% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	P	D	L	S	N	E	E	A	L	E	S	A	A	I	L	S	L	V	N	A	E	S	V	Q	K	Q	W	R	Q	R	P	F	R	S	P	H	H	S	A	S	L	T	A	M	V	G	G	G	A	I	P	G	P	G	E	I	S
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	G	G	.	.	.	.	.	.	.	.	.	.	S	V	L	S	F	A	N	H	K	S	H	F	W	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure								S	S	S	S	S												T	T		.	.	.	.	.	.	.	.	.	.					T	T	S		T	T	S		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.											.	.	.	.	.	.	.	460	.	.	.	.	.	.	.																														.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	A	H	N	G	V	L	F	L	D	E	L	P	E	F	E	R	R	T	L	D	A	.	L	R	E	P	I	E	S	G	Q	I	H	L	S	R	T	R	A	K	I	T	Y	P	A	R	F	Q	L	V	A	A	M	N	P	S	P	T
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		L	A	D	T	R	A	A	L	V	D	D	A	T	H	A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q
Template Known Secondary structure		G	G	T		S						S												T	T						S	S							S	S	S															S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions