Job Description P22787 Confidence 96.09% Date Thu Jan 5 11:39:10 GMT 2012 Rank 235 Aligned Residues 83 % Identity 23% Template c2gk7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: structural and functional insights into the human upf1 helicase core Resolution 2.80 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	V	C	A	F	L	E	G	K	H	A	L	E	R	P	K	P	T	D	A	V	S	R	A	L	Q	H	D	L	S	D	V	I	G	Q	E	Q	G	K	R	G	L	E	I	T	A	A	G	G	H	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	P	D	L	S	N	E
Query Conservation
Alig confidence																																			.	.													.
Template Conservation																																			.	.													.
Template Sequence		G	Y	I	Y	H	K	L	L	G	H	E	V	E	D	V	I	I	K	C	Q	L	P	K	R	F	T	A	Q	G	L	P	D	L	.	.	N	H	S	Q	V	Y	A	V	K	T	V	L	.	Q	R	P	L	S	L	I	Q	G	P	P	G	T	G	K	T	V	T	S	A	T	I	V	Y	H	L	A	R	Q	G	N	G
Template Known Secondary structure									T	T														S			S		T	T	S				.	.												T	.	T	S	S								T	T	S																T		S	S
Template Predicted Secondary structure																																			.	.													.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.			.	.	.	.	.	.	.	.	480	.	.	.		.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		241	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	E	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	L	V	C	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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