Job Description P22787 Confidence 100.00% Date Thu Jan 5 11:39:10 GMT 2012 Rank 10 Aligned Residues 167 % Identity 20% Template c1z0eF_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:putative protease la homolog type; PDBTitle: crystal structure of a. fulgidus lon proteolytic domain Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																		.																										.
Query SS confidence														.																		.																										.
Query Sequence		S	L	S	I	V	H	T	R	A	A	L	G	.	V	N	A	P	P	I	T	V	E	V	H	I	S	K	G	L	P	.	G	L	T	M	V	G	L	P	E	T	T	V	K	E	A	R	D	R	V	R	S	A	I	I	N	.	S	G	Y	E	Y	P	A	K	K	I	T	I	N	L	A	P	A	D	L	P	K	E	G
Query Conservation														.																		.																										.
Alig confidence														.																		.																										.
Template Conservation
Template Sequence		E	V	G	R	V	N	G	L	A	V	I	G	E	S	A	G	I	V	L	P	I	I	A	E	V	T	P	S	M	E	G	R	V	I	A	T	G	R	L	Q	E	I	A	R	E	A	V	M	N	V	S	A	I	I	K	K	Y	T	G	R	D	I	S	N	M	D	V	H	I	Q	F	V	G	T	Y	E	G	V	E	G
Template Known Secondary structure				T									T	T	T																							S	T	T										T	T							T	S	S			G	G	G								S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.
Predicted Secondary structure																																																											.													.	.	.	.
Query SS confidence																																																											.													.	.	.	.
Query Sequence		G	R	Y	D	L	P	I	A	I	A	L	L	A	A	S	E	Q	L	T	A	N	K	L	D	E	Y	E	L	V	G	E	L	A	L	T	G	A	L	R	G	V	P	G	A	I	S	S	A	T	E	A	I	K	S	G	R	K	.	I	I	V	A	K	D	N	E	D	E	V	G	.	.	.	.	L	I	N	G	E	G
Query Conservation																																																											.													.	.	.	.
Alig confidence																							.	.																																			.													.	.	.	.
Template Conservation																							.	.
Template Sequence		D	S	A	S	I	S	I	A	T	A	V	I	S	A	I	E	G	I	P	V	D	.	.	Q	S	V	A	M	T	G	S	L	S	V	K	G	E	V	L	P	V	G	G	V	T	Q	K	I	E	A	A	I	Q	A	G	L	K	K	V	I	I	P	K	D	N	I	D	D	V	L	L	D	A	E	H	E	G	K	I	E
Template Known Secondary structure			T	T	B													T					.	.	T	T									T	T	S	B					S												T	T								G	G	G	G	G	G					T	T	T	T	T	T	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.			.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	I	A	D	H	L	Q	A	V	C	A	F	L	E	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	P	V	S	R	I	N	E	V	L	E	H	V	L	E	D
Template Known Secondary structure						S	B									B
Template Predicted Secondary structure
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions