Job Description P22787 Confidence 98.95% Date Thu Jan 5 11:39:10 GMT 2012 Rank 89 Aligned Residues 156 % Identity 25% Template c1sxjA_ PDB info PDB header:replication Chain: A: PDB Molecule:activator 1 95 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.																				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	S	D	V	I	G	Q	E	Q	G	K	R	G	L	E	I	T	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	P	D	L	S	N	E	E	A	L	E	S	A	A	I	L
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	Q	Q	V	C	G	N	K	G	S	V	M	K	L	K	N	W	L	A	N	W	E	N	S	K	K	N	S	F	K	H	A	G	K	D	G	S	G	V	F	R	A	A	M	L	Y	G	P	P	G	I	G	K	T	T	A	A	H	L	V	A	Q	E	L	.	.	.	.	.	.	.	.	.	.	G	Y	D	I	L
Template Known Secondary structure		S	G	G	G			S														T							T	T	T					T	T	S	T	T	S		S							S	T	T	S	S												T	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370											.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		S	L	V	N	A	E	S	V	Q	K	Q	W	R	Q	R	P	F	R	S	P	H	H	S	A	S	L	T	A	M	V	G	G	G	A	I	P	G	P	G	E	I	S	L	A	H	N	G	V	L	F	L	D	E	L	P	E	F	E	R	R	.	.	.	T	L	D	A	L	R	E	P	I	E	S	G	Q	I	H	L	S
Query Conservation																																																														.	.	.
Alig confidence																																								.	.	.	.	.	.	.																.	.	.															.	.	.
Template Conservation																																								.	.	.	.	.	.	.																																	.	.	.
Template Sequence		E	Q	N	A	S	D	V	R	S	K	T	L	L	N	A	G	V	K	N	A	L	D	N	M	S	V	V	G	Y	F	K	H	Q	N	L	N	G	K	.	.	.	.	.	.	.	H	F	V	I	I	M	D	E	V	D	G	M	S	G	G	D	R	G	G	V	G	Q	L	A	Q	F	C	R	K	T	S	T	.	.	.
Template Known Secondary structure					T	T	S										T	G	G	G	G	T	T				S	T	T	T	T	T				S	S	T	T	.	.	.	.	.	.	.	S							S	G	G	G			T	T	S	T	T													S	S	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.								.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	R	A	K	I	T	Y	P	A	R	F	Q	L	V	A	A	M	N	P	S	P	T	G	H	Y	Q	G	N	H	N	R	C	T	P	E	Q	T	L	R	Y	L	N	R	L	S	G	P	F	L	D	R	F	D	L	S	L	E	I	P	L	P	P	P	G	I	L	S	K	T	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation		.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	P	L	I	L	I	C	N	E	R	N	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	R	P	F	D	R	V	C	.	L	D	I	Q	F	R	R	P	D	A	N	S	I	K	S	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.							S		T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	G	G	G	T	T	T	S	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
												450	.	.	.	.	.	.	.	.	.	460	.																							.	.	.	.	.	.	.	.	470		.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions