Job Description P22787 Confidence 99.83% Date Thu Jan 5 11:39:10 GMT 2012 Rank 19 Aligned Residues 223 % Identity 18% Template c1r6bX_ PDB info PDB header:hydrolase Chain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.												.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		S	D	V	I	G	Q	E	Q	G	K	R	G	L	E	I	T	A	.	.	.	.	.	.	.	.	.	.	.	A	G	G	H	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	.	P	D	L	S	N	E	E	A	L	E	S	A	A	I	L	S	L	V	N	A	E	S	V	Q
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		M	L	V	F	G	Q	D	K	A	I	E	A	L	T	E	A	I	K	M	A	R	A	G	L	G	H	E	H	K	P	V	G	S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	G	I	E	L	L	R	F	D	M	S	E	Y	M	E	R	H	T	V	S	R	L	I	G	A	P
Template Known Secondary structure		T	T	S		S																	T	T		S		T	T	S		S								S	T	T	S	S													T								G	G	G		S	S	S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	W	R	Q	R	P	F	R	S	P	H	H	S	A	S	L	T	A	M	V	G	G	G	A	I	P	G	P	G	E	I	S	L	A	H	N	G	V	L	F	L	D	E	L	P	E	F	E	R	R	T	L	D	A	L	R	E	P	I	E	S	G	Q	I	H	L	S	R	T	R	A	K	I	T	Y	P	A	R	F
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																																	.									.
Template Conservation						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																																	.									.
Template Sequence		P	G	Y	V	.	.	.	.	.	.	.	.	.	G	F	D	Q	G	G	L	L	T	D	A	V	I	K	H	P	.	.	.	.	.	.	.	H	A	V	L	L	L	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	M	D	N	G	T	L	T	D	N	.	N	G	R	K	A	D	F	R	.	N	V
Template Known Secondary structure		S		S		.	.	.	.	.	.	.	.	.					T	T										S	.	.	.	.	.	.	.	S							T	G	G	G	S															S					T	.	T	T						T	.	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																																	.									.
Template SS confidence
		538	.	540	.										.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.								.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.		590	.	.	.	.	.	.	.		.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	A	A	M	N	P	S	P	T	G	H	Y	Q	G	N	H	N	R	C	T	P	E	Q	T	L	R	Y	L	N	R	L	S	G	P	F	L	D	R	F	D	L	S	L	E	I	P	L	P	P	P	G	I	L	S	K	T	V	V	P	G	E	S	S	A	T	V	K	Q	R	V	M	A	A	R	E	R	Q	F
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	M	T	T	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	R	A	M	E	E	I	K	K	I	F	T	P	E	F	R	N	R	L	D	N	I	I	W	F	D	H	L	S	T	D	V	I	H	.	.	.	.	.	.	.	.	.	Q	V	V	D	K	F	I	V	E	L	Q	V	Q	L	D
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	.	.	.	.	.	S											S						T	T		S															.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		600	.	.	.	.	.	.	.														.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.										.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	N	K	L	N	A	W	L	D	S	P	E	I	R	Q	F	C	K	L	E	S	E	D	A	M	W	L	E	G	T	L	I	H	L	G	L	S	I	R	A	W	Q	R	L	L	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	G	V	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	S	Q	E	A	R	N	W	L	A	E	K	G	Y	D	R	A	M	G	A	R	P	M	A	R	V	I	Q
Template Known Secondary structure			T	T				.	.	.	.	.	.	.	.	.	.	.	.	.																B	T	T	T	B	T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		675	.	.	.	.	680														.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions