Job Description P22787 Confidence 99.44% Date Thu Jan 5 11:39:10 GMT 2012 Rank 63 Aligned Residues 219 % Identity 29% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.															.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	D	A	V	S	R	A	L	Q	H	D	L	S	D	V	I	G	Q	E	Q	G	K	R	G	L	E	I	T	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	H	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	P	D	L	S	N	E	E	A	L
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		R	A	R	V	L	T	E	A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						B								G	G	G	S	S	S																								T	T													T	T	S	S												T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.							.	.	.	310	.	.	.	.
Predicted Secondary structure																																																				.	.	.														.	.	.	.	.	.
Query SS confidence																																																				.	.	.														.	.	.	.	.	.
Query Sequence		E	S	A	A	I	L	S	L	V	N	A	E	S	V	Q	K	Q	W	R	Q	R	P	F	R	S	P	H	H	S	A	S	L	T	A	M	V	G	G	G	A	I	P	G	P	G	E	I	S	L	A	.	.	.	H	N	G	V	L	F	L	D	E	L	P	E	F	.	.	.	.	.	.	E	R	R	T	L	D	A	L
Query Conservation																																																				.	.	.														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.														.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	F	I	T	A	S	G	S	D	F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														S	T	T	T															T	S		S							T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		R	E	P	I	E	S	G	Q	I	H	L	S	R	T	R	A	K	I	T	Y	P	A	R	F	Q	L	V	A	A	M	N	P	S	P	T	G	H	Y	Q	G	N	H	N	R	C	T	P	E	Q	T	L	R	Y	L	N	R	L	S	G	P	F	L	.	.	D	R	F	D	L	S	L	E	I	P	L	P	P	P	G	I
Query Conservation																																																																.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	E	M	D	G	.	.	.	.	.	.	.	.	.	.	.	F	E	K	D	T	A	I	V	V	M	A	A	T	N	R	P	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G
Template Known Secondary structure						T	T	.	.	.	.	.	.	.	.	.	.	.			T	T										S		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	T	T	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.												.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.																						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	K	T	V	V	P	G	E	S	S	A	T	V	K	Q	R	V	M	A	A	R	E	R	Q	F	K	R	Q	N	K	L	N	A	W	L	D	S	P	E	I	R	Q	F	C	K	L	E	S	E	D	A	M	W	L	E	G	T	L	I	H	L	G	L	S	I	R	A	W	Q	R	L	L	K	V	A	R	T	I	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	I	H	A	R	G	K	P	L	A	E	D	V	D	L	A	L	L	A	K	R	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S		B		T	T									T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		331	.	.	.																			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.																	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	Q	S	D	I	I	T	R	Q	H	L	Q	E	A	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	E	G	R	R	K	I	T	M	K	D	L	E	E	A	A	S
Template Known Secondary structure				T	T			S	B									T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions