 |
Job Description | P75737 | Confidence | 5.09% | Date | Thu Jan 5 12:13:36 GMT 2012 |
Rank | 45 | Aligned Residues | 25 |
% Identity | 28% | Template | c2xxzA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:lysine-specific demethylase 6b; |
PDBTitle: crystal structure of the human jmjd3 jumonji domain
|
Resolution | 1.80 Å |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | D | W | L | L | T | P | K | D | . |
. |
. |
. |
. |
K | T | R | G | L | T | G | S | I | A | V | N | I | A | P |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |
|   |
|   |   |   |
|   |
|
|
|
|   |   |
Template Sequence |   |
P | G | D | L | V | W | I | N | A | G | T | V | H | W | V | Q | A | T | G | W | C | N | N | I | A | W | N | V | G | P |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1455 | . | . | . | . | 1460 | . | . | . | . | . | . | . | . | . | 1470 | . | . | . | . | . | . | . | . | . | 1480 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|