Job Description P75737 Confidence 23.54% Date Thu Jan 5 12:13:36 GMT 2012 Rank 9 Aligned Residues 24 % Identity 42% Template c2xi1A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:nef; PDBTitle: crystal structure of the hiv-1 nef sequenced from a patient's sample Resolution 3.50 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	S	A	Q	E	K	V	G	L	N	P	G	W	Q	C	Y	T	S	F	F	M	R	V	C	Q	G	K	P	G	T	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		D	L	W	V	Y	H	T	Q	G	Y	F	P	D	W	Q	C	Y	T	.	.	.	.	.	.	.	.	P	G	P	G	V	R
Template Known Secondary structure											B		S					B		.	.	.	.	.	.	.	.		S	S	S		B
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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