Return to main results Retrieve Phyre Job Id

Job DescriptionP28369
Confidence2.88%DateThu Jan 5 11:44:56 GMT 2012
Rank78Aligned Residues16
% Identity13%Templated1m3ya1
SCOP infoNucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........
Predicted Secondary structure 





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Query Sequence  YRPHHGRKNWFLGIGR
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Template Conservation 

  







 
 
Template Sequence  FKTVYRRYTNFAIESI
Template Known Secondary structure  S








Template Predicted Secondary structure 





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   27..30.........40..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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