Job Description P28369 Confidence 4.44% Date Thu Jan 5 11:44:56 GMT 2012 Rank 48 Aligned Residues 57 % Identity 23% Template c2yqrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0907 protein; PDBTitle: solution structure of the kh domain in kiaa0907 protein Resolution UNK

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		80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	G	G	Q	H	V	.	.	.	.	N	K	T	D	S	A	V	R	A	T	H	L	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	V	K	V	Q	S	E	R	S	Q	H	A	N	K	R	L	A	R	L	L	I	A	W	K	L	E	Q	Q	Q	Q	E	N	S	A
Query Conservation									.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	G	C	S	Y	L	Q	H	I	Q	I	E	T	G	A	K	V	F	L	R	G	K	G	S	G	C	I	E	P	A	S	G	R	E	A	F	E	P	M	Y	I	Y	I	S	H	P	K	P	E	G	L	A	A	A	K	K	L	C	E	N	L	L	Q	T	V	H	A	E	Y	S	R	F	V	N	Q
Template Known Secondary structure			G	G	G																		S	B	T	T	T				T	T	T	S	S			S	S	B								S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions