Job Description P28369 Confidence 100.00% Date Thu Jan 5 11:44:56 GMT 2012 Rank 6 Aligned Residues 150 % Identity 16% Template c1zbtA_ PDB info PDB header:translation Chain: A: PDB Molecule:peptide chain release factor 1; PDBTitle: crystal structure of peptide chain release factor 1 (rf-1) (smu.1085)2 from streptococcus mutans at 2.34 a resolution Resolution 2.34 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		M	L	E	T	E	T	G	R	Y	S	D	T	L	R	S	A	L	V	S	L	D	G	D	N	A	W	A	L	S	E	S	W	C	G	T	I	Q	W	I	C	P	S	P	Y	R	P	H	H	G	R	K	N	W	F	L	G	I	G	R	F	T	A	D	E	Q	.	.	.	.	E	Q	S	D	A	I	R	Y	E	T	L
Query Conservation																																																																			.	.	.	.
Alig confidence													.																																																						.	.	.	.
Template Conservation													.
Template Sequence		V	X	E	A	S	A	N	G	V	G	G	.	L	K	E	V	V	A	X	V	S	G	Q	S	V	Y	S	K	L	K	Y	E	S	G	A	H	R	V	Q	R	V	P	V	T	E	S	Q	G	R	V	H	T	S	T	A	T	V	L	V	X	P	E	V	E	E	V	E	Y	E	I	D	P	K	D	L	R	V	D	I	Y
Template Known Secondary structure									S	S	S		.										S	T	T						G	G	G											T	T		S	S																		G	G	G	S				G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	S	G	P	G	G	Q	H	V	N	K	T	D	S	A	V	R	A	T	H	L	A	S	G	I	S	V	K	V	Q	S	E	R	S	Q	H	A	N	K	R	L	A	R	L	L	I	A	W	K	L	E	Q	Q	Q	Q	E	N	S	A	A	L	K	S	Q	R	R	M	F	H	H	Q	I	E	R	G	N	P	R	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																																																				.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																																				.	.	.
Template Sequence		H	A	.	.	.	.	.	.	.	.	.	K	V	A	T	A	V	R	I	I	H	L	P	T	N	I	K	V	E	X	Q	E	E	R	T	Q	Q	K	N	R	D	K	A	X	K	I	I	R	A	R	V	A	D	H	F	A	Q	I	A	Q	D	E	.	.	.	Q	D	A	T	V	G	T	G	D	R	S	E	R	I	R
Template Known Secondary structure				.	.	.	.	.	.	.	.	.											T	T	T	T							S	S	S	S																												.	.	.	T					S		S		T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																																				.	.	.
Template SS confidence
		229	230										.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		157	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	T	G	M	A	F	I
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		T	Y	N	F	.	P	Q	N
Template Known Secondary structure					T	.	T	T	T
Template Predicted Secondary structure						.
Template SS confidence
		310	.	.	.		.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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