 |
Job Description | P28369 | Confidence | 3.41% | Date | Thu Jan 5 11:44:56 GMT 2012 |
Rank | 62 | Aligned Residues | 35 |
% Identity | 20% | Template | c1kqsA_ |
PDB info |
PDB header:ribosome | Chain: A: PDB Molecule:ribosomal protein l2; |
PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis
|
Resolution | 3.10 Å |
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | T | L | R | S | S | G | P | G | G | Q | H | V | N | K | T | D | S | A | V | R | A | T | H | L | A | S | G | I | S | V | K | V | Q | S | E |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|
| . |
|
|
|
|
|   |
|   |
|   |   |   |
Template Sequence |   |
K | F | A | R | A | S | G | V | N | A | Q | L | L | T | H | D | R | N | V | A | V | V | K | . |
L | P | S | G | E | M | K | R | L | D | P | Q |
Template Known Secondary structure |   |
| B | S |
| S | T | T |
|
|  |  |  |  |  |
|
| S | S |
|  |  |  |  | . |
| T | T | S |
|  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|