 |
Job Description | P0AF01 | Confidence | 2.53% | Date | Thu Jan 5 11:24:44 GMT 2012 |
Rank | 34 | Aligned Residues | 35 |
% Identity | 14% | Template | c3mp7B_ |
PDB info |
PDB header:protein transport | Chain: B: PDB Molecule:preprotein translocase subunit sece; |
PDBTitle: lateral opening of a translocon upon entry of protein suggests the2 mechanism of insertion into membranes
|
Resolution | 2.90 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | L | T | D | P | E | W | Q | A | V | L | L | S | L | K | V | S | S | L | A | V | L | F | S | L | P | F | G | I | F | F | A | W | L |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|
Template Sequence |   |
L | V | T | K | K | P | N | W | A | T | Y | K | R | A | A | K | I | T | G | L | G | I | I | L | I | G | L | I | G | M | L | I | R | I | V |
Template Known Secondary structure |   |
 |  | S |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|