Job Description P0AF01 Confidence 100.00% Date Thu Jan 5 11:24:44 GMT 2012 Rank 3 Aligned Residues 223 % Identity 20% Template c3fh6F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli Resolution 4.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		L	T	D	P	E	W	Q	A	V	L	L	S	L	K	V	S	S	L	A	V	L	F	S	L	P	F	G	I	F	F	A	W	L	L	V	R	C	T	F	P	G	K	A	L	L	D	S	V	L	H	L	P	L	V	L	P	P	V	V	V	G	Y	L	L	L	V	S	M	G	R	R	G	F	I	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S
Template Known Secondary structure		S		S																																T		S	S	S	S															S		S											S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
			77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	E	R	L	Y	D	W	F	G	I	T	F	A	F	S	W	R	G	A	V	L	A	A	A	V	M	S	F	P	L	M	V	R	A	I	R	L	A	L	E	G	V	D	V	K	L	E	Q	A	A	R	T	L	G	A	G	R	W	R	V	F	F	T	I	T	L	P	L	T	L	P	G	I	I	V	G	T	V	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A
Template Known Secondary structure				S	S					S	S	S	S																															S															S							T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		A	F	A	R	S	L	G	E	F	G	A	T	I	T	F	V	S	N	I	P	.	.	.	.	.	.	.	.	.	G	E	T	R	T	I	P	S	A	M	Y	T	L	I	Q	T	P	G	.	.	.	G	E	S	G	A	A	R	L	C	I	I	S	I	A	L	A	M	I	S	L	L	I	S	E	W	L	A	R	I	S
Query Conservation																						.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V	N	L	K	A	T	R	M	K
Template Known Secondary structure								T										S	S		S			S	S		S	S	S			S	S										T	T		S	S	S	S		S	S																										S	S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		224	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		513	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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