 |
Job Description | P0AF01 | Confidence | 1.77% | Date | Thu Jan 5 11:24:44 GMT 2012 |
Rank | 63 | Aligned Residues | 36 |
% Identity | 8% | Template | c2v79B_ |
PDB info |
PDB header:dna-binding protein | Chain: B: PDB Molecule:dna replication protein dnad; |
PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis
|
Resolution | 2.00 Å |
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | V | R | A | I | R | L | A | L | E | G | V | D | V | K | L | E | Q | A | A | R | T | L | G | A | G | R | W | R | V | F | F | T | I | T | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |
|   |   |
|   |
|   |
|
Template Sequence |   |
F | I | D | M | Q | E | Q | G | T | S | T | I | P | N | L | L | L | T | H | Y | K | Q | L | G | L | N | E | T | E | L | I | L | L | L | K | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|