Job Description P0ACY3 Confidence 96.99% Date Thu Jan 5 11:19:25 GMT 2012 Rank 111 Aligned Residues 126 % Identity 19% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	I	E	Q	I	V	S	Y	L	K	H	A	A	Q	G	L	E	E	K	K	Q	I	L	Y	L	L	G	P	V	G	G	G	K	S	S	L	A	E	R	L	K	S	L	M	Q	L	V	P	I	Y	V	L	S	A	N	G	E	R	S	P	V	N	D	H	P	F	C	L	F	N	P	Q	E	D	A	Q	I	L
Query Conservation
Alig confidence																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		E	E	F	L	K	K	C	M	Q	F	Y	Y	M	Q	K	T	Q	Q	A	.	.	.	.	.	L	I	L	V	G	K	A	G	C	G	K	T	A	T	W	K	T	V	I	D	A	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	D	G	H	A	N	V	V	Y	V	.	.	.	.	.	.	.	.
Template Known Secondary structure																S	S				.	.	.	.	.							T	T	S	S	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S	S								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		2051	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.						2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.															.	.	.	.	.	.	.	2100	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	E	Y	G	I	P	R	R	Y	L	G	T	I	M	S	P	W	A	A	K	R	L	H	E	F	G	G	D	I	T	K	F	R	V	V	K	V	W	P	S	I	L	Q	Q	I	A	I	A	K	T	E	P	G	D	E	N	N	Q	D	I	S	A	L	V	G	K	V	D	I	R	K	L	E	H	Y	A	Q	N	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	K	V	L	T	K	E	S	L	Y	G	S	M	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S		T	T	S	S	S	S	S	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																							2104	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.															.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	A	Y	G	Y	.	S	G	A	L	C	R	A	N	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	M	E	F	V	E	M	F	K	A	P	I	K	V	L	H	P	L	L	T	A	T	Q	E	G	N	Y	N	G	T	E	G	I	S	A	L	P	F	N	G	I	I	L	A	H	S	N
Query Conservation								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																				.	.	.	.
Template Conservation																																						.	.																				.	.	.	.
Template Sequence		K	A	T	L	E	W	R	D	G	L	F	T	S	I	L	R	R	V	N	D	D	I	T	G	T	F	K	N	S	R	I	W	V	V	F	D	.	.	S	D	L	D	P	E	Y	V	E	A	M	N	S	V	L	D	D	N	K	.	.	.	.	G	E	R	L	P	I	P	P	N	F	R	I	L	F	E	T	D
Template Known Secondary structure			S	S	T	T																S	S			S	S										S	.	.	S		S		S	T	T							T	T		B			.	.	.	.				B												S
Template Predicted Secondary structure																																						.	.																				.	.	.	.
Template SS confidence
		2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.			.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.					.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions