Job Description P0ACY3 Confidence 99.92% Date Thu Jan 5 11:19:25 GMT 2012 Rank 3 Aligned Residues 285 % Identity 21% Template c3nbxX_ PDB info PDB header:hydrolase Chain: X: PDB Molecule:atpase rava; PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp Resolution 2.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	F	Y	G	M	E	D	A	I	E	Q	I	V	S	Y	L	K	H	A	A	Q	G	L	E	E	K	K	Q	I	L	Y	L	L	G	P	V	G	G	G	K	S	S	L	A	E	R	L	K	S	L	M	Q	L	V	P	I	Y	V	L	S	A	N	G	E	R	S	P	V	N	D	H	P	F	C	L	F	N	P	Q
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	L	S	G	E	.	.	.	.	.	.	.	.	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		S	S															T		.	.	.	.	.	.	.	.								S	S	S	S								G	G	G	G	B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	Q	I	L	E	K	E	Y	G	I	P	R	R	Y	L	G	T	I	M	S	P	W	A	A	K	R	L	H	E	F	G	G	D	I	T	K	F	R	V	V	K	V	W	P	S	I	L	Q	Q	I	A	I	A	K	T	E	P	G	D	E	N	N	Q	D	I	S	A	L	V	G	K	V	D	I	R	K	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.									.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.									.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	.	.	.	.	.	E	E	V	F	G	P	L	S	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T				.	.	.	.	.							B		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.									.	.	.	.	.
Template SS confidence
																																																	65	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	A	Q	N	D	P	D	A	Y	G	Y	S	G	A	L	C	R	A	N	Q	G	I	M	E	F	V	E	M	F	K	A	P	I	K	V	L	H	P	L	L	T	A	T	Q	E	G	N	Y	N	G	T	E	G	I	S	A	L	P	F	N	G	I	I	L	A	H	S	N	E	S	E	W	V	T	F	R	N	N	K
Query Conservation
Alig confidence		.					.	.	.	.	.	.	.									.	.																																																			.	.	.	.	.
Template Conservation		.					.	.	.	.	.	.	.									.	.																																																			.	.	.	.	.
Template Sequence		.	E	R	L	T	.	.	.	.	.	.	.	S	G	Y	L	P	E	A	E	.	.	I	V	F	L	D	E	I	W	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E	L	P	E	.	.	.	.	.	A	D	S
Template Known Secondary structure		.		B			.	.	.	.	.	.	.	T	T	S	G	G	G		S	.	.						S	G	G	G															S	S					S	S	S														S	S				.	.	.	.	.	T	T
Template Predicted Secondary structure		.					.	.	.	.	.	.	.									.	.																																																			.	.	.	.	.
Template SS confidence
			98	.	100	.								.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.
		316	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		N	N	E	A	F	L	D	R	V	.	Y	I	V	K	V	P	Y	C	L	R	I	S	E	E	I	K	I	Y	E	K	L	L	N	H	S	E	L	T	H	A	P	C	A	P	G	T	L	E	T	L	S	R	F	S	I	L	S	R	L	K	E	P	E	N	S	S	I	Y	S	K	M	R	V	Y	D	G	E	S	L	K
Query Conservation											.
Alig confidence											.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	E	A	L	Y	D	R	M	L	I	R	L	W	L	D	K	V	Q	D	K	A	N	F	R	S	M	L	T	S	Q	Q	D	E	N	D	N	P	V	P	D	A	L	Q	V	T	D	E	E	Y	E	R	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	I	G	E	I	T	L	P
Template Known Secondary structure		T	T					T	T									S												T					T	T	S			S		T	T	T	S	B										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T		B
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																		.	.	.	220	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																								.												.	.
Query SS confidence																								.												.	.
Query Sequence		D	T	D	P	K	A	K	S	Y	Q	E	Y	R	D	Y	A	G	V	D	E	G	M	.	N	G	L	S	T	R	F	A	F	K	I	.	.	L	S	R	V	F	N	F	D	H	V	E	V	A	A	N	P	V	H	L	F	Y	V	L	E	Q	Q	I	E	R	E	Q	F	P	Q	E	Q	A	E	R	Y	L	E	F	L
Query Conservation																								.												.	.
Alig confidence			.	.	.																			.												.	.																					.	.										.	.
Template Conservation			.	.	.																																																					.	.										.	.
Template Sequence		D	.	.	.	H	V	F	E	L	I	F	M	L	R	Q	Q	L	D	K	L	P	D	A	P	Y	V	S	D	R	R	W	K	K	A	I	R	L	L	Q	A	S	A	F	F	S	G	R	S	A	V	A	P	V	D	L	I	.	.	L	L	K	D	C	L	W	Y	D	.	.	A	Q	S	L	N	L	I	Q	Q	Q	I
Template Known Secondary structure			.	.	.																	S	S	S																						T	T		S	B			G	G	G	G	G	.	.	G	G	G	G	T	S		S	S	.	.
Template Predicted Secondary structure			.	.	.																																																					.	.										.	.
Template SS confidence
		226				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.
		472	.	.	.							.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		K	G	Y	L	.	.	.	.	.	.	I	P	K	Y	A	E	F	I	G	K	E	I	Q	T	A	Y
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	L	M	T	G	H	A	W	Q	Q	Q	G	M	L	T	R	L	G	A	I	V	Q	R	H	L
Template Known Secondary structure								T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions