Job Description P0ACY3 Confidence 96.72% Date Thu Jan 5 11:19:25 GMT 2012 Rank 125 Aligned Residues 176 % Identity 14% Template c1xnjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1 Resolution 1.98 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																						.	.	.	.	.
Query SS confidence																																			.	.																						.	.	.	.	.
Query Sequence		Q	G	L	E	E	K	K	Q	I	L	Y	L	L	G	P	V	G	G	G	K	S	S	L	A	E	R	L	K	S	L	M	Q	L	.	.	V	P	I	Y	V	L	S	A	N	G	E	R	S	P	V	N	D	H	P	F	C	.	.	.	.	.	L	F	N	P	Q	E	D	A	Q	I	L	E	K	E	Y	G	I	P	R
Query Conservation																																			.	.																						.	.	.	.	.
Alig confidence																																			.	.																						.	.	.	.	.
Template Conservation
Template Sequence		T	R	G	G	F	R	G	C	T	V	W	L	T	G	L	S	G	A	G	K	T	T	V	S	M	A	L	E	E	Y	L	V	C	H	G	I	P	C	Y	T	L	D	G	D	N	I	R	Q	G	L	N	K	N	L	G	F	S	P	E	D	R	E	E	N	V	R	R	I	A	E	V	A	K	L	F	A	D	A	G	L
Template Known Secondary structure		S	S		S											S	T	T	S	S															T	T								T	T	T						T	T	T			S	S	T	T																				T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		R	Y	L	G	T	I	M	S	P	W	.	.	.	.	.	.	A	A	K	R	L	H	E	F	G	G	D	I	T	K	F	R	V	V	K	V	W	P	S	I	L	Q	Q	I	A	I	A	K	T	E	P	G	D	E	N	N	Q	D	I	S	A	L	V	G	K	V	D	I	R	K	L	E	H	Y	A	Q	N	D	P	D
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.						.
Template Conservation																																													.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.						.
Template Sequence		V	C	I	T	S	F	I	S	P	Y	T	Q	D	R	N	N	A	R	Q	I	H	E	G	A	S	L	P	F	F	E	V	F	V	D	A	P	L	H	V	C	E	Q	R	.	.	.	.	.	.	.	.	.	D	V	K	G	L	Y	K	K	A	R	A	G	E	I	K	.	.	.	.	.	.	.	G	F	T	G	I	.
Template Known Secondary structure																								T	T	T																			.	.	.	.	.	.	.	.	.		T	T	S							S	S		S	S	.	.	.	.	.	.	.	S		B	T	T	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.						.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	G	Y	S	G	A	L	C	R	A	N	Q	G	I	M	E	F	V	E	M	F	K	A	P	I	K	V	L	H	P	L	L	T	A	T	Q	E	G	N	Y	N	G	T	E	G	I	S	A	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	S	E	Y	E	K	P	E	A	P	E	L	V	L	K	T	D	S	C	D	V	N	D	C	V	Q	Q	V	V	E	L	L	Q	E	R	D	I	V	P	V	D	A	S	Y	E	V
Template Known Secondary structure		.	.	.	.	T	B						S	S		S					T	T	S	S																T	T	S	S							S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions