Job Description P29217 Confidence 24.72% Date Thu Jan 5 11:45:38 GMT 2012 Rank 148 Aligned Residues 101 % Identity 12% Template d1yg2a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.20

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		E	V	A	L	I	T	T	L	L	L	R	G	A	Q	T	P	G	E	L	R	S	R	A	A	R	M	Y	.	.	.	.	E	F	S	D	M	A	E	V	E	S	T	L	E	Q	L	A	N	R	E	D	G	P	F	V	V	R	L	A	R	E	P	G	K	R	E	N	R	Y	M	H	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.		.																		.	.	.					.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation												.																						.																		.	.	.					.	.	.	.	.	.	.
Template Sequence		P	H	V	I	L	T	V	L	S	T	.	R	D	A	T	G	Y	D	I	T	K	E	F	S	A	S	I	G	Y	F	W	K	.	A	S	H	Q	Q	V	Y	R	E	L	N	K	M	G	E	Q	G	.	.	.	L	V	T	C	.	.	.	.	.	.	.	V	L	E	V	Y	S	I	T	Q	A	G	R	S	A	L	G
Template Known Secondary structure												.			B										T	T	G	G	G	G	T			.																T	T	.	.	.	S				.	.	.	.	.	.	.
Template Predicted Secondary structure												.																						.																		.	.	.					.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
							166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	F	S	G	E	V	E	D	Q	P	A	V	T	D	M	S	N	A	V	D	G	D	L	Q	A	R	V	E	A	L	E	I	E	V	A	E	L	K	Q	R	L	D	S	L	L	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		E	W	F	D	Q	P	T	A	H	P	T	V	R	D	E	F	S	A	K	L	M	A	C	S	V	Q	S	A	E	P	Y	R	L	Q	L	A	E	L	V	E	E	S	R	K	L	V	A	H	Y	Q	E
Template Known Secondary structure						S																	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions