Job Description P29217 Confidence 80.19% Date Thu Jan 5 11:45:38 GMT 2012 Rank 31 Aligned Residues 75 % Identity 13% Template d1xmaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	C	L	L	E	K	Q	V	T	T	P	E	Q	Y	P	L	S	V	N	G	V	V	T	A	C	N	Q	K	T	N	R	E	P	V	M	N	L	S	E	S	E	V	Q	E	Q	L	D	N	L	V	K	R	H	Y	L	R	T	V	S	G	F	G	N	R	V	T	K	Y	E	Q	R	F	C	N	S	E	F	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																				.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																				.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	S	L	L	I	E	G	.	.	.	.	.	.	.	.	D	S	Y	G	Y	E	I	S	K	N	I	R	I	K	T	D	E	L	Y	.	.	V	I	K	E	T	T	L	Y	S	A	F	A	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	K	R	R	T	Y	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	.	.	.	.	.	.	.																T	T	S		.	.																	T	T	S															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																				.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.									.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	K	L	S	A	A	E	V	A	L	I	T	T	L	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Y	R	I	T	P	E	G	I	K	Y	Y	K	Q	K	C
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			77	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions