Job Description P29217 Confidence 73.77% Date Thu Jan 5 11:45:38 GMT 2012 Rank 45 Aligned Residues 67 % Identity 16% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		F	G	D	L	K	L	S	A	A	E	V	A	L	I	T	T	L	L	L	R	G	.	A	Q	T	P	G	E	L	R	S	R	A	A	R	M	Y	E	F	S	D	M	A	E	V	E	S	T	L	E	Q	L	A	N	R	E	D	G	P	F	V	V	R	L	A	R	E	P	G	K	R	E	N	R	Y	M
Query Conservation																							.
Alig confidence																							.														.	.	.	.	.																	.	.	.
Template Conservation																																					.	.	.	.	.																	.	.	.
Template Sequence		A	K	I	H	G	L	N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	.	.	.	.	.	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	G	.	.	.	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A
Template Known Secondary structure					T	T																S	S												T		.	.	.	.	.															T	T	.	.	.	S							T	T		S	S
Template Predicted Secondary structure																																					.	.	.	.	.																	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions