Return to main results Retrieve Phyre Job Id

Job DescriptionP29217
Confidence76.45%DateThu Jan 5 11:45:38 GMT 2012
Rank41Aligned Residues81
% Identity16%Templatec3g3zA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator, marr family; PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  NRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLARE
Query Conservation 


 

 
         
 
   
 


  







 






 

  
 
   

  
  
  
   



 


 
Alig confidence 















































.....















...







Template Conservation        
           


  
  

  
      
   

    
.....    

  
  
   
...

 
    
Template Sequence  GTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIGEKWSL. . . . . PKQTVSGVCKTLAGQG. . . LIEWQEGE
Template Known Secondary structure  TTT


SB
T
.....
TT...S


S
Template Predicted Secondary structure 









.....
...

Template SS confidence 















































































   8.10.........20.........30.........40.........50..... ....60.........70. ........
 
   156...160....
Predicted Secondary structure 





Query SS confidence 








Query Sequence  PGKRENRYM
Query Conservation 

 

 

 
Alig confidence 








Template Conservation   
 
   
 
Template Sequence  QDRRKRLLS
Template Known Secondary structure  S
GGGS
Template Predicted Secondary structure 








Template SS confidence 








   80........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions