Job Description P29217 Confidence 57.08% Date Thu Jan 5 11:45:38 GMT 2012 Rank 82 Aligned Residues 79 % Identity 18% Template c3f8fA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, padr-like family; PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin Resolution 2.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	R	V	I	G	C	L	L	E	K	Q	V	T	T	P	E	Q	Y	P	L	S	V	N	G	V	V	T	A	C	N	Q	K	T	N	R	E	P	V	M	N	L	S	E	S	E	V	Q	E	Q	L	D	N	L	V	K	R	H	Y	L	R	T	V	S	G	F	G	N	R	V	T	K	Y	E	Q	R	F	C	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.																				.	.																																		.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																				.	.																																		.	.	.	.	.	.
Template Sequence		T	N	V	I	L	L	N	V	L	K	Q	G	.	.	.	.	.	.	.	.	D	N	Y	V	Y	G	I	I	K	Q	V	K	E	A	S	N	G	E	M	.	.	E	L	N	E	A	T	L	Y	T	I	F	K	R	L	E	K	D	G	I	I	S	S	Y	W	G	D	E	G	G	R	R	K	Y	.	.	.	.	.	.
Template Known Secondary structure														.	.	.	.	.	.	.	.		B													T	T	T	S		.	.																	T	T	S															.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																				.	.																																		.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	F	G	D	L	K	L	S	A	A	E	V	A	L	I	T	T	L	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	R	L	T	E	I	G	H	E	N	M	R	L	A	F
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							79	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions