Return to main results Retrieve Phyre Job Id

Job DescriptionP29217
Confidence89.46%DateThu Jan 5 11:45:38 GMT 2012
Rank11Aligned Residues80
% Identity24%Templatec3cjnA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  NRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLARE
Query Conservation 


 

 
         
 
   
 


  







 






 

  
 
   

  
  
  
   



 


 
Alig confidence 















































.....















...



...
Template Conservation                    


  
  

  
      
  


  
 
.....    

  
  
   
... 
 
... 
Template Sequence  NRIXGRYNANLRKEXTALGLSTAKXRALAILSAKDGLPIGTLGIFAVV. . . . . EQSTLSRALDGLQADG. . . LVRR. . . E
Template Known Secondary structure  TTT

S
ST
.....
TT...S...
Template Predicted Secondary structure 










.....


...
...
Template SS confidence 















































































   28.30.........40.........50.........60.........70..... ....80.........90. .... .
 
   156...160......
Predicted Secondary structure 





Query SS confidence 










Query Sequence  PGKRENRYMHL
Query Conservation 

 

 

 

Alig confidence 










Template Conservation    
 
     
Template Sequence  VDDQRSSRVYL
Template Known Secondary structure 


SS
Template Predicted Secondary structure 


Template SS confidence 










   97..100.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions